Job Description Q6BF17 Confidence 100.00% Date Thu Jan 5 12:37:31 GMT 2012 Rank 57 Aligned Residues 344 % Identity 22% Template c2fkpC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:n-acylamino acid racemase; PDBTitle: the mutant g127c-t313c of deinococcus radiodurans n-2 acylamino acid racemase Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.						.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.									.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.																										.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.																										.	.	.	.	.	.	.	.
Query Sequence		M	K	I	T	K	I	T	T	Y	R	L	P	.	.	.	.	.	P	R	W	M	F	L	K	I	E	T	D	E	G	V	V	G	W	G	E	P	V	I	E	G	R	.	.	.	.	.	.	.	.	A	R	T	V	E	A	A	V	H	E	L	G	D	Y	L	I	G	Q	D	P	S	R	I	N	D	L	W	Q	V	M
Query Conservation														.	.	.	.	.																										.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.																										.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	K	I	E	A	A	E	I	V	V	A	R	L	P	L	K	T	H	K	V	V	P	L	L	I	L	H	G	E	G	V	Q	G	V	A	E	G	T	M	E	A	R	P	M	Y	R	E	E	T	I	A	G	A	L	D	L	L	R	G	T	F	L	P	A	I	L	G	Q	T	F	A	N	P	E	A	V	S	D	A	L
Template Known Secondary structure																B														T	T										B	S	S	S	S	S	S	S		B											T						T	T				S	S								T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	A	G	F	Y	R	G	G	P	I	L	M	S	A	I	A	G	I	D	Q	A	L	W	D	I	K	G	K	V	L	N	A	P	V	W	Q	L	M	G	G	L	V	R	D	K	I	K	A	Y	S	W	V	G	G	D	R	P	A	D	V	I	D	G	I	K	T	L	R	E	I	G	F	D	T	F	K	L	N	G
Query Conservation
Alig confidence								.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.
Template Sequence		G	S	Y	R	G	N	.	.	.	.	.	.	R	M	A	R	A	M	V	E	M	A	A	W	D	L	W	A	R	T	L	G	V	P	L	C	T	L	L	G	G	H	K	E	Q	V	E	V	G	V	S	L	G	I	Q	A	D	E	Q	A	T	V	D	L	V	R	R	H	V	E	Q	G	Y	R	R	I	K	L	K	I
Template Known Secondary structure			S			S		.	.	.	.	.	.																				T		B						T				S				B								S	S													T	T	T		S
Template Predicted Secondary structure								.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.							.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	E	E	L	G	L	I	D	N	S	R	A	V	D	A	A	V	N	T	V	A	Q	I	R	E	A	F	G	N	Q	I	E	F	G	L	D	F	H	G	R	V	S	A	P	M	A	K	V	L	I	K	E	L	E	P	Y	R	P	L	F	I	E	E	P	V	L	A	E	Q	A	E	Y	Y	P	K	L	A	A	Q	T
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.															.																					.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.															.																					.
Template Sequence		K	P	G	.	.	.	.	.	.	.	.	.	.	.	W	D	V	Q	P	V	R	A	T	R	E	A	F	P	.	D	I	R	L	T	V	D	A	N	S	A	Y	T	L	A	D	A	G	R	L	.	R	Q	L	D	E	Y	D	L	T	Y	I	E	Q	P	L	A	W	D	D	L	V	D	H	A	E	L	A	R	R	I
Template Known Secondary structure		B	T	T	.	.	.	.	.	.	.	.	.	.	.	B	S												S	.	S	S							T	T				G	G	G					.		G	G	G	G	G			S						S		T	T		S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.															.																					.
Template SS confidence
		172	.	.												.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		H	I	P	L	A	A	G	E	R	M	F	S	R	F	D	F	K	R	V	L	E	A	G	G	I	S	I	L	Q	P	D	L	S	H	A	G	G	I	T	E	C	Y	K	I	A	G	M	A	E	A	Y	D	V	T	L	A	P	H	C	P	L	.	G	P	I	A	L	A	A	C	L	H	I	D	F	V	S	Y	N	A
Query Conservation																																																															.
Alig confidence																																																															.
Template Conservation
Template Sequence		R	T	P	L	C	L	D	E	S	V	A	S	A	S	D	A	R	K	A	L	A	L	G	A	G	G	V	I	N	L	K	V	A	R	V	G	G	H	A	E	S	R	R	V	H	D	V	A	Q	S	F	G	A	P	V	W	C	G	G	M	L	E	S	G	I	G	R	A	H	N	I	H	L	S	C	L	S	N	F	R
Template Known Secondary structure		S	S					S	T	T			S											T	S		S						T	T	T	T	T	S														T	T																						T	T	S	T	T	B
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	Q	E	Q	S	M	G	I	H	Y	N	K	G	A	E	L	L	D	F	V	K	N	K	E	D	F	S	M	V	G	G	F	F	K	P	L	T	K	P	G	L	G	V	E	I	D	E	A	K	V	I	E	F	S	K	N	A	P	D	W	R	N
Query Conservation
Alig confidence										.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.
Template Sequence		L	P	G	D	T	S	S	A	.	.	.	.	.	.	S	R	Y	W	E	R	D	L	I	Q	E	P	L	E	A	V	D	G	L	M	P	V	P	Q	G	P	G	T	G	V	T	L	D	R	E	F	L	A	T	V	T	E	A	Q	E	E	H	R	A
Template Known Secondary structure		S		B	S				G	.	.	.	.	.	.	G	G	T	B	S	S		S	B	S	S					B	T	T							S	S	B	T	S			B
Template Predicted Secondary structure										.	.	.	.	.	.
Template SS confidence
		319	320	.	.	.	.	.	.							.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions