Job Description Q6BF17 Confidence 100.00% Date Thu Jan 5 12:37:31 GMT 2012 Rank 28 Aligned Residues 342 % Identity 23% Template c2chrA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:chloromuconate cycloisomerase; PDBTitle: a re-evaluation of the crystal structure of chloromuconate2 cycloisomerase Resolution 3.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.																	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.									.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Query Sequence		M	K	I	T	K	I	T	T	Y	R	L	P	P	R	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	F	L	K	I	E	T	D	E	G	V	V	G	W	G	E	P	V	I	E	G	R	A	.	.	.	.	.	.	.	.	R	T	V	E	A	A	V	H	E	L	G	D	Y	L	I	G	Q	D
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.															.	.	.	.	.	.	.	.
Template Conservation																																									.
Template Sequence		M	K	I	D	A	I	E	A	V	I	V	D	V	P	T	K	R	P	I	Q	M	S	I	T	T	V	H	Q	Q	S	Y	V	I	V	R	V	Y	S	E	.	G	L	V	G	V	G	E	G	G	S	V	G	G	P	V	W	S	A	E	C	A	E	T	I	K	I	I	V	E	R	Y	L	A	P	H	L	L	G	T	D
Template Known Secondary structure																							S	S															B	T	.	T	B									S	T	T	T	T	T	S	S														T					T	T	S
Template Predicted Secondary structure																																									.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		P	S	R	I	N	D	L	W	Q	V	M	Y	R	A	G	F	Y	R	G	G	P	I	L	M	S	A	I	A	G	I	D	Q	A	L	W	D	I	K	G	K	V	L	N	A	P	V	W	Q	L	M	G	G	L	V	R	D	K	I	K	A	Y	S	W	V	G	G	.	D	R	P	A	D	V	I	D	G	I	K	T	L
Query Conservation																																																																				.
Alig confidence																				.	.	.	.	.																																												.
Template Conservation																				.	.	.	.	.
Template Sequence		A	F	N	V	S	G	A	L	Q	T	M	A	R	A	V	T	G	N	.	.	.	.	.	A	S	A	K	A	A	V	E	M	A	L	L	D	L	K	A	R	A	L	G	V	S	I	A	E	L	L	G	G	P	L	R	S	A	I	P	I	A	W	T	L	A	S	G	D	T	K	R	D	L	D	S	A	V	E	M	I
Template Known Secondary structure		T	T											T	T		S	S		.	.	.	.	.																			T	T							T	T			S		S				B						S	S
Template Predicted Secondary structure																				.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.						.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	I	G	F	D	T	F	K	L	N	G	C	E	E	L	G	L	I	D	N	S	R	A	V	D	A	A	V	N	T	V	A	Q	I	R	E	A	F	G	N	Q	I	E	F	G	L	D	F	H	G	R	V	S	A	P	M	A	K	V	L	I	K	E	L	E	P	Y	R	P	L	F	I	E	E	P	V	L	A	E
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.
Template Sequence		E	R	R	R	H	N	R	F	K	V	K	L	G	F	.	.	.	.	.	.	.	.	R	S	P	Q	D	D	L	I	H	M	E	A	L	S	N	S	L	G	S	K	A	Y	L	R	V	D	V	N	Q	A	W	D	E	Q	V	A	S	V	Y	I	P	E	L	E	A	L	G	V	E	L	I	E	Q	P	V	G	R	E
Template Known Secondary structure			T	T	S									S	S	.	.	.	.	.	.	.	.	S																T	T	T	T	S							T	T				T												T	T	T								S		S	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.									.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		Q	A	E	Y	Y	P	K	L	A	A	Q	T	H	I	P	L	A	A	G	E	R	M	F	S	R	F	D	F	K	R	V	L	E	A	G	G	I	S	I	L	Q	P	D	L	S	H	A	G	G	I	T	E	C	Y	K	I	A	G	M	A	E	A	Y	D	V	T	L	A	P	H	C	P	L	.	G	P	I	A	L	A
Query Conservation																																																																											.
Alig confidence																																																																											.
Template Conservation
Template Sequence		N	T	Q	A	L	R	R	L	S	D	N	N	R	V	A	I	M	A	D	E	S	L	S	T	L	A	S	A	F	D	L	A	R	D	R	S	V	D	V	F	S	L	K	L	C	N	M	G	G	V	S	A	T	Q	K	I	A	A	V	A	E	A	S	G	I	A	S	Y	G	G	T	M	L	D	S	T	I	G	T	S
Template Known Secondary structure														S	S					S	S	S			S									T	T	T			S										T	S															T									S
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	C	L	H	I	D	F	V	S	Y	N	A	V	L	Q	E	Q	S	M	G	I	H	Y	N	K	G	A	E	L	L	D	F	V	K	N	K	E	D	F	S	M	V	G	G	F	F	K	P	L	T	K	P	G	L	G	V	E	I	D	E	A	K	V	I	E	F	S	K
Query Conservation
Alig confidence																						.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.
Template Sequence		V	A	L	Q	L	Y	S	T	V	P	S	L	P	F	G	C	E	L	I	G	.	.	.	.	.	.	P	F	V	L	A	D	T	L	S	H	E	P	L	E	I	R	D	Y	E	L	Q	V	P	T	G	V	G	H	G	M	T	L	D	E	D	K	V	R	Q	Y	A	R
Template Known Secondary structure								T	T	S	S			T	T		B					.	.	.	.	.	.				B	S			S	B	S					B		S	S							S	S	S	T	T			B
Template Predicted Secondary structure																						.	.	.	.	.	.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.							.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions