Job Description Q6BF17 Confidence 26.71% Date Thu Jan 5 12:37:31 GMT 2012 Rank 450 Aligned Residues 190 % Identity 16% Template c1vliA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:spore coat polysaccharide biosynthesis protein spse; PDBTitle: crystal structure of spore coat polysaccharide biosynthesis protein2 spse (bsu37870) from bacillus subtilis at 2.38 a resolution Resolution 2.38 Å

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		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	R	P	A	D	V	I	D	G	I	K	T	L	R	E	I	G	F	D	T	F	K	L	N	G	C	E	E	L	G	L	I	D	N	S	R	A	V	D	A	A	V	N	T	V	A	Q	I	R	E	A	F	G	N	Q	I	E	F	G	L	D	F	H	G	R	V	S	A	P	M	A	K	V	L	I	K	E	L	E
Query Conservation
Alig confidence																																								.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	G	K	L	D	Q	A	F	A	L	I	D	A	A	A	E	A	G	A	D	A	V	K	F	Q	X	F	Q	A	D	R	X	Y	Q	K	D	P	D	.	.	.	.	.	V	S	I	F	S	L	V	Q	S	X	.	.	.	.	.	.	.	.	.	.	.	.	E	X	P	A	E	W	I	L	P	L	L	D	Y	C	R
Template Known Secondary structure		T	T																T		S							B		G	G	G	G	T	S					.	.	.	.	.							G	G	G	B	.	.	.	.	.	.	.	.	.	.	.	.	S	S		G	G	G
Template Predicted Secondary structure																																								.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.						.	.	.	.	70	.	.	.	.	.													.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.																					.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.					250	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Query Sequence		P	Y	R	P	L	F	I	E	E	P	V	L	A	E	Q	A	E	Y	Y	P	K	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	T	H	I	P	L	A	A	G	E	R	M	F	S	R	F	D	F	K	R	V	L	E	A	.	.	.	.	G	G	I	S	I	L	Q	P
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Template Conservation
Template Sequence		E	K	Q	V	I	F	L	S	T	V	C	D	E	G	S	A	D	L	L	Q	S	T	S	P	S	A	F	K	I	A	S	Y	E	I	N	H	L	P	L	L	K	Y	V	A	R	L	N	R	P	X	I	F	S	T	A	G	A	E	I	S	D	V	H	E	A	W	R	T	I	R	A	E	G	N	N	Q	I	A	I	X
Template Known Secondary structure			T	T						B			S									T	T			S						G	G	G	T	T										T	T		S							T	T															T	T	T
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		258	.	260	.	.	.					.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.				280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure								.	.	.	.																	.	.	.
Query SS confidence								.	.	.	.																	.	.	.
Query Sequence		D	L	S	H	A	G	.	.	.	.	G	I	T	E	C	Y	K	I	A	G	M	A	E	A	Y	D	.	.	.	V	T	L	A	P	H	C	P	L	G	P	I	A	L	A	A	C	L	H	I	D	F	V	S	Y	N	A	V	L	Q	E	Q	S	M	G	I	H	Y	N	K	G	A	E	L	L	D	F	V	K	N	K
Query Conservation								.	.	.	.																	.	.	.
Alig confidence								.	.	.	.																	.	.	.											.	.	.	.	.
Template Conservation																																									.	.	.	.	.
Template Sequence		H	C	V	A	K	Y	P	A	P	P	E	Y	S	N	L	S	V	I	P	X	L	A	A	A	F	P	E	A	V	I	G	F	S	D	H	S	E	H	P	.	.	.	.	.	T	E	A	P	C	A	A	V	R	L	G	A	K	L	I	E	K	H	F	T	I	D	K	N	L	P	G	A	D	H	S	F	A	L	N	P
Template Known Secondary structure					S	S	S	S			G	G	G			T	T									S	T	T	S									S	S	S	.	.	.	.	.	S									T	T		S						B		S		T	T	S	S		S	S		T	T	S	B
Template Predicted Secondary structure																																									.	.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.						.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		331	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	E	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		255	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions