Job Description Q6BF17 Confidence 29.60% Date Thu Jan 5 12:37:31 GMT 2012 Rank 434 Aligned Residues 171 % Identity 15% Template c1mpgB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:3-methyladenine dna glycosylase ii; PDBTitle: 3-methyladenine dna glycosylase ii from escherichia coli Resolution 1.80 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	Y	R	L	P	P	R	W	M	F	L	K	I	E	T	D	E	G	V	V	G	W	G	E	P	V	I	E	G	R	A	R	T	V	E	A	A	V	H	E	L	G	D	Y	L	I	G	Q	D	P	S	R	I	N	D	L	W	Q	V	M	Y	R	A	G	F	Y	R	G	G	P	I	L	M	S	A	I	A	G	I
Query Conservation
Alig confidence																																													.								.
Template Conservation																																													.								.
Template Sequence		R	S	L	A	V	G	E	Y	R	G	V	V	T	A	I	P	D	I	A	R	H	T	L	H	I	N	L	S	A	G	L	E	P	V	A	A	E	C	L	A	K	M	S	.	R	L	F	D	L	Q	C	.	N	P	Q	I	V	N	G	A	L	G	R	L	G	A	A	R	P	G	L	R	L	P	G	C	V	D	A	F
Template Known Secondary structure							T	T											T	T	T	T								G	G	G	G	G	G										.			T	T	T	T		.										G	G	G	T	T	T		T	T							S
Template Predicted Secondary structure																																													.								.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.									.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.																															.
Query SS confidence																	.	.	.	.	.	.	.	.																															.
Query Sequence		D	Q	A	L	W	D	I	K	G	K	V	L	N	A	P	.	.	.	.	.	.	.	.	V	W	Q	L	M	G	G	L	V	R	D	K	I	K	A	Y	S	W	V	G	G	D	R	P	A	D	V	I	D	G	.	I	K	T	L	R	E	I	G	F	D	T	F	K	L	N	G	C	E	E	L	G	L	I	D	N	S
Query Conservation																	.	.	.	.	.	.	.	.																															.
Alig confidence																	.	.	.	.	.	.	.	.																		.	.	.											.																	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.																												.	.	.	.	.	.	.	.	.	.
Template Sequence		E	Q	G	V	R	A	I	L	G	Q	L	V	S	V	A	M	A	A	K	L	T	A	R	V	A	Q	L	Y	G	E	R	L	D	D	F	P	E	Y	I	C	.	.	.	F	P	T	P	Q	R	L	A	A	A	D	P	Q	A	L	K	A	L	G	M	P	L	K	R	A	E	A	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										T	T	T	S																	S		B		S	S	S	T	T		B		.	.	.									S	S								T	T	S								.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																										.	.	.																												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.				.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	V	D	A	A	V	N	T	V	A	Q	I	R	E	A	F	G	N	Q	I	E	F	G	L	D	F	H	G	R	V	S	A	P	M	A	K	V	L	I	K	E	L	E	P	Y	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.													.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.													.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	L	I	H	L	A	N	A	A	L	E	G	T	.	.	.	L	P	M	T	I	P	G	D	V	E	Q	A	M	K	T	L	Q	T	F	P	G	I	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.											T		.	.	.	S		S	S			S											T	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.													.	.	.
Template SS confidence
											182	.	.	.	.	.	.	.	190	.	.	.				.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions