Job Description Q6BF17 Confidence 100.00% Date Thu Jan 5 12:37:31 GMT 2012 Rank 89 Aligned Residues 300 % Identity 20% Template c1jpdX_ PDB info PDB header:isomerase Chain: X: PDB Molecule:l-ala-d/l-glu epimerase; PDBTitle: l-ala-d/l-glu epimerase Resolution 2.60 Å

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		2	.	.	.	.	.	.	.	10	.	.	.											.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.						.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Query Sequence		K	I	T	K	I	T	T	Y	R	L	P	P	.	.	.	.	.	.	.	.	.	.	R	W	M	F	L	K	I	E	T	D	E	G	V	V	G	W	G	E	P	V	I	E	G	R	A	.	.	.	.	.	R	T	V	E	A	A	V	H	E	L	G	D	Y	L	I	G	Q	D	P	S	R	I	N	D	L	W	Q	V
Query Conservation														.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.											.															.	.	.	.	.																												.
Template Conservation																																		.																																															.
Template Sequence		H	M	R	T	V	K	V	F	E	E	A	W	P	L	H	T	P	S	R	S	E	A	R	V	V	V	V	E	L	E	E	E	.	G	I	K	G	T	G	E	C	T	P	Y	P	R	Y	G	E	S	D	A	S	V	M	A	Q	I	M	S	V	V	P	Q	L	E	K	G	L	T	R	E	E	L	Q	K	I	L	P	.
Template Known Secondary structure		S													B	S					S												T	.	T											G	G	G	T												T	T						T	T										S		.
Template Predicted Secondary structure																																		.																																															.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Y	R	A	G	F	Y	R	G	G	P	I	L	M	S	A	I	A	G	I	D	Q	A	L	W	D	I	K	G	K	V	L	N	A	P	V	W	Q	L	M	G	G	L	V	R	D	K	I	K	A	Y	S	W	V	G	G	D	R	P	A	D	V	I	D	G	I	K	T	L	R	E	I	G	F	D	T	F	K	L	N
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	A	G	A	A	R	N	A	L	D	C	A	L	W	D	L	A	A	R	R	Q	Q	Q	S	L	A	D	L	I	G	I	T	L	P	E	T	V	I	T	A	Q	T	V	V	I	G	T	P	D	Q	M	A	N	S	A	S	T	L	W	Q	A	G	A	K	L	L	K	V	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	S	S																	T	T	T								T					S				B						S																T	T		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	C	E	E	L	G	L	I	D	N	S	R	A	V	D	A	A	V	N	T	V	A	Q	I	R	E	A	F	G	N	Q	I	E	F	G	L	D	F	H	G	R	V	S	A	P	M	A	K	V	L	I	K	E	L	E	P	Y	R	P	L	F	I	E	E	P	V	L	A	E	Q	A	E	Y	Y	P	K	L	A	A	Q
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.															.																																																		.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.															.																																																		.
Template Sequence		L	D	N	H	.	.	.	.	.	.	.	.	.	.	.	L	I	S	E	R	M	V	A	I	R	T	A	V	P	.	D	A	T	L	I	V	D	A	N	E	S	W	R	A	E	G	L	A	A	R	C	Q	L	L	A	D	L	G	V	A	M	L	E	Q	P	L	P	A	Q	D	D	A	A	L	E	N	F	I	H	.
Template Known Secondary structure				S	S	.	.	.	.	.	.	.	.	.	.	.														T	.	T	S							T	T				S	T	T											T	T								S		T	T	S		G	G	G	G	S	S			.
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.															.																																																		.
Template SS confidence
		152	.	.	.												.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		T	H	I	P	L	A	A	G	E	R	M	F	S	R	F	D	F	K	R	V	L	E	A	G	G	I	S	I	L	Q	P	D	L	S	H	A	G	G	I	T	E	C	Y	K	I	A	G	M	A	E	A	Y	D	V	T	L	A	P	H	C	P	L	.	G	P	I	A	L	A	A	C	L	H	I	D	F	V	S	Y	N
Query Conservation																																																																.
Alig confidence		.																				.	.																																									.
Template Conservation		.																				.	.
Template Sequence		.	P	L	P	I	C	A	D	E	S	C	H	T	R	S	N	L	K	A	L	.	.	K	G	R	Y	E	M	V	N	I	K	L	D	K	T	G	G	L	T	E	A	L	A	L	A	T	E	A	R	A	Q	G	F	S	L	M	L	G	C	M	L	C	T	S	R	A	I	S	A	A	L	P	L	V	P	Q	V	S	F
Template Known Secondary structure		.	S	S					S	T	T		S	S	G	G	G					.	.	B	T	T	B	S										T	S														T	T									S										G	G	G	G	G	G		S
Template Predicted Secondary structure		.																				.	.
Template SS confidence
			219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.			.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	L	Q	E	Q	S	M	G	I	H	Y	N	K	G	A	E	L	L	D	F	V	K	N	K	E	D	F	S	M	V	G	G	F	F	K	P
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.												.
Template Conservation			.	.	.	.	.	.	.	.	.	.												.
Template Sequence		A	.	.	.	.	.	.	.	.	.	.	D	L	D	G	P	T	W	L	A	V	D	.	V	E	P	A	L	Q	F	T	T	G	E	L	H	L
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.				G	G	G	G	B	S	S		.		S	S						T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.												.
Template SS confidence
		296											.	.	.	300	.	.	.	.	.	.	.		.	.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions