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Job DescriptionQ6BF17
Confidence100.00%DateThu Jan 5 12:37:31 GMT 2012
Rank50Aligned Residues341
% Identity25%Templatec1f9cA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:protein (muconate cycloisomerase i); PDBTitle: crystal structure of mle d178n variant
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10... ......20.........30....... ..40.........50.........60........
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Query Sequence  ITKITTYRLPP. . . . . . RWMFLKIETDEGVVGWGEPVIEGR. . . . . . . . ARTVEAAVHELGDYLIGQDPSRINDLWQVMY
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Template Sequence  IERIDAIIVDLPTIQQQTLVVLRVRCSDGVEGIGEATTIGGLAYGYESPEGIKANIDAHLAPALIGLAADNINAAMLKLD
Template Known Secondary structure  B

TTS

SSTTTTSS

TTGGGTTTSBTT
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   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   6970.........80.........90.........100.........110.........120 .........130.........140.......
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Query Sequence  RAGFYRGGPILMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWV. GGDRPADVIDGIKTLREIGFDTFKLNG
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Template Sequence  ALAKGN. . . . . TFAKSGIESALLDAQGKRLGLPVSELLGGRVRDSLEVAWTLASGDTARDIAEARHMLEIRRHRVFKLKI
Template Known Secondary structure 
SS
.....T
BTT

S
SB

SS
TTS
S
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   96...100. ........110.........120.........130.........140.........150.........160.........170
 
   148.150.........160.........170.........180.........190.........200.........210.........220.......
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Query Sequence  CEELGLIDNSRAVDAAVNTVAQIREAFGNQIEFGLDFHGRVSAPMAKVLIKELEPYRPLFIEEPVLAEQAEYYPKLAAQT
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Template Sequence  GAN. . . . . . . . PVEQNLKHVVTIKRELGDSASVRVDVNQYWDESQAIRACQVLGDNGIDLIEQPISRINRGGQVRLNQRT
Template Known Secondary structure  SSS........
GGGS
TT
B
TTT



B
TT

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   171.. ......180.........190.........200.........210.........220.........230.........240..
 
   228.230.........240.........250.........260.........270.........280........ .290.........300......
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Query Sequence  HIPLAAGERMFSRFDFKRVLEAGGISILQPDLSHAGGITECYKIAGMAEAYDVTLAPHCPL. GPIALAACLHIDFVSYNA
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Template Sequence  PAPIMADESIESVEDAFSLAADGAASIFALKIAKNGGPRAVLRTAQIAEAAGIGLYGGTMLEGSIGTLASAHAFLTLRQL
Template Known Secondary structure  SS
STT
SST

S
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S


TT
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   243......250.........260.........270.........280.........290.........300.........310.........320..
 
   307..310.........320.........330.........340.........350.........360..
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Query Sequence  VLQEQSMGIHYNKGAELLDFVKNKEDFSMVGGFFKPLTKPGLGVEIDEAKVIEFSK
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Template Sequence  TWGTELFG. . . . . . PLLLTEEIVNEPPQYRDFQLHIPRTPGLGLTLDEARLARFAR
Template Known Secondary structure  TT
B


G......GGGBS

SBSS


SS



SBTS

B
B
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   323......330 .........340.........350.........360.........370..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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