Job Description P30015 Confidence 99.93% Date Wed Jan 25 15:20:48 GMT 2012 Rank 83 Aligned Residues 193 % Identity 27% Template c3i32A_ PDB info PDB header:rna binding protein,hydrolase Chain: A: PDB Molecule:heat resistant rna dependent atpase; PDBTitle: dimeric structure of a hera helicase fragment including the c-terminal2 reca domain, the dimerization domain, and the rna binding domain Resolution 2.80 Å

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		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	E	T	G	I	L	D	E	V	L	R	H	R	S	T	I	V	F	T	N	S	R	G	L	A	E	K	L	T	A	R	L	N	E	L	Y	A	A	R	L	Q	R	S	P	S	I	A	V	D	A	A	H	F	E	S	T	S	G	A	T	S	N	R	V	Q	S	S	D	V	F	I	A	R	S	H	H	G	S	V
Query Conservation
Alig confidence										.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	V	L	S	D	L	L	Y	.	V	A	S	P	D	R	A	M	V	F	T	R	T	K	A	E	T	E	E	I	A	Q	G	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	G	H	P	A	Q	A	L	H	G	D	M
Template Known Secondary structure										.					S	S						S	S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T								S
Template Predicted Secondary structure										.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.																																		260	.	.	.	.	.	.	.	.	.	270	.	.
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	E	Q	R	A	I	T	E	Q	A	L	K	S	G	E	L	R	C	V	V	A	T	S	S	L	E	L	G	I	D	M	G	A	V	D	L	V	I	Q	V	A	T	P	L	S	V	A	S	G	L	Q	R	I	G	R	A	G	H	Q	V	G	G	V	S	K	G	L	F	F	P	R	T	R	R	D	L	V	D	S
Query Conservation
Alig confidence																																																													.	.	.	.	.	.														.	.
Template Conservation																																																													.	.	.	.	.	.														.	.
Template Sequence		S	Q	G	E	R	E	R	V	M	G	A	F	R	Q	G	E	V	R	V	L	V	A	T	D	V	A	A	R	G	L	D	I	P	Q	V	D	L	V	V	H	Y	R	M	P	D	R	A	E	A	Y	Q	H	R	S	G	R	T	G	G	.	.	.	.	.	.	R	V	V	L	L	Y	G	P	R	E	R	R	D	.	.
Template Known Secondary structure			T													T	S								S	T	T	T		S	T	T					S					S	S			S	S	T	T							T					.	.	.	.	.	.								S	S	T				.	.
Template Predicted Secondary structure																																																													.	.	.	.	.	.														.	.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.							.	.	.	.	.	.	.	.	340	.	.	.	.
		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.			.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
Predicted Secondary structure																																																						.	.
Query SS confidence																																																						.	.
Query Sequence		A	V	I	V	E	C	M	F	A	G	R	L	E	N	L	T	P	P	H	N	P	L	D	V	L	A	Q	Q	T	V	A	A	A	A	M	D	A	L	Q	V	D	E	W	Y	S	R	V	R	R	A	A	P	.	.	W	K	D	L	P	R	R	V	F	D	A	T	L	D	M	L	S	G	R	Y	P	S	G	D
Query Conservation																																																						.	.
Alig confidence																						.																																.	.
Template Conservation																						.
Template Sequence		V	E	A	L	E	R	A	V	G	R	R	F	K	R	V	N	P	P	T	P	.	E	E	V	L	E	A	K	W	R	H	L	L	A	R	L	A	R	V	P	E	K	D	Y	R	L	Y	Q	D	F	A	G	R	L	F	A	E	G	R	V	E	V	V	A	A	L	L	A	L	L	L	G	G	A	P	A	E	R
Template Known Secondary structure										T												.																T	T	S							T	T											T														T						B
Template Predicted Secondary structure																						.
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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