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Job DescriptionP30015
Confidence99.95%DateWed Jan 25 15:20:48 GMT 2012
Rank74Aligned Residues194
% Identity16%Templatec3fhcB_
PDB info PDB header:transport protein/hydrolaseChain: B: PDB Molecule:atp-dependent rna helicase ddx19b; PDBTitle: crystal structure of human dbp5 in complex with nup214
Resolution2.80 Å

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  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  FSPATRDWF. LRAFKQPTAVQPQTWHVAAR. . SEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYI
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Template Sequence  LKPQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANKYP. . . . . . . . . . QCLCL
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Query Sequence  SPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLR
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Template Sequence  SPTYELALQTGKVIEQMGKFY. . . . . . . . . . . PELKLAYAVRGNKLERG. . . QKISEQIVIGTPGTVLDWCSKLKFIDPK
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Query Sequence  GVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRS. . ASDVAAFLGGDRPVTV
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Template Sequence  KIKVFVLDEADVMIATQG. . . HQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKL
Template Known Secondary structure  G



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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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