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Job DescriptionP30015
Confidence95.67%DateWed Jan 25 15:20:48 GMT 2012
Rank182Aligned Residues140
% Identity14%Templatec3dmdA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus
Resolution2.21 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   47..50.........60.........70.........80.........90.........100.........110.........120......
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Query Sequence  ALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNL
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Template Sequence  IMFVGFNGSGKTTTIAKLANWLK. . . . . . . . . . . NHGFSVVIAASDTFRAGAIEQLEEHAKRI. . . . . . . . . . . . . . . GV
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   126...130.........140........ .150.........160.........170....... ..
 
   127..130.........140.........150.........160.... .....170.........180.........190.........200.....
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Query Sequence  RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS. RARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLH
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Template Sequence  KV. . . . . . . . . . . . . . . . . . . . . IKHSYGADPAAVAYDAIQHAKARGIDVVLIDTAGR. . . SETNRNLMDEMKKIARVTK
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   180. ........190.........200.........210...... ...220.........230.....
 
   206...210......... 220.........230......
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Query Sequence  TSAQRIGLSATVRS. . ASDVAAFLGGDRPVTVV
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Template Sequence  PNLVIFVGDALAGNAIVEQARQFNEAVKIDGII
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   236...240.........250.........260........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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