Job Description P30015 Confidence 99.91% Date Wed Jan 25 15:20:48 GMT 2012 Rank 86 Aligned Residues 164 % Identity 23% Template c3b6eA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:interferon-induced helicase c domain-containing protein 1; PDBTitle: crystal structure of human dech-box rna helicase mda5 (melanoma2 differentiation-associated protein 5), dech-domain Resolution 1.60 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	T	A	V	Q	P	Q	T	W	H	V	A	A	R	S	E	H	A	L	V	I	A	P	T	G	S	G	K	T	L	A	A	F	L	Y	A	L	D	R	L	F	R	E	G	G	E	D	T	R	E	A	H	K	R	K	T	S	R	I	L	Y	I	S	P	I	K	A	L	G	T	D	V	Q	R	N	L	Q	I	P
Query Conservation
Alig confidence																																															.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.
Template Sequence		Q	L	R	P	Y	Q	M	E	V	A	Q	P	A	L	E	G	K	N	I	I	I	C	L	P	T	G	S	G	K	T	R	V	A	V	Y	I	A	K	D	H	L	D	K	K	K	.	.	.	.	.	.	.	K	A	S	E	P	G	K	V	I	V	L	V	N	K	V	L	L	V	E	Q	L	F	R	K	E	F	Q	P
Template Known Secondary structure																T	T								S																						.	.	.	.	.	.	.		T	T										S	S											T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.								.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	G	I	A	D	E	R	R	R	R	G	E	T	E	V	N	L	R	V	G	I	R	T	G	D	T	P	A	Q	E	R	S	K	L	T	R	N	P	P	D	I	L	I	T	T	P	E	S	L	Y	L	M	L	T	S	R	A	R	E	T	L	R	G	V	E	T	V	I	I	D	E	V	H	A	V	A	G	S	K
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.																.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.																.	.
Template Sequence		F	L	K	K	.	.	.	.	.	.	.	.	.	.	.	.	W	Y	R	V	I	G	L	S	G	L	K	I	S	F	P	E	V	V	K	S	C	D	.	.	.	I	I	I	S	T	A	Q	I	L	E	N	S	L	L	N	.	.	G	V	Q	L	S	D	F	S	L	I	I	I	D	E	C	V	Y	N	N	I	M	R
Template Known Secondary structure				T	T	.	.	.	.	.	.	.	.	.	.	.	.	T	S																				S	.	.	.																.	.				G	G	G		S					T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.																.	.
Template SS confidence
		380	.	.	.													.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.				.	.	.	.	410	.	.	.	.	.	.	.	.	.	420			.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.				.	.	210	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.
Query SS confidence																					.	.	.
Query Sequence		R	G	A	H	L	A	L	S	L	E	R	L	D	A	L	L	H	T	S	.	.	.	A	Q	R	I	G	L	S	A	T
Query Conservation																					.	.	.
Alig confidence																					.	.	.
Template Conservation
Template Sequence		H	Y	L	M	Q	K	L	K	N	N	R	L	K	K	E	N	K	P	V	I	P	L	P	Q	I	L	G	L	T	A	S
Template Known Secondary structure																T	T
Template Predicted Secondary structure
Template SS confidence
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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