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Job DescriptionP30015
Confidence99.91%DateWed Jan 25 15:20:48 GMT 2012
Rank86Aligned Residues164
% Identity23%Templatec3b6eA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:interferon-induced helicase c domain-containing protein 1; PDBTitle: crystal structure of human dech-box rna helicase mda5 (melanoma2 differentiation-associated protein 5), dech-domain
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.........60.........70.........80.........90.........100........
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Query Sequence  QPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIP
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Template Sequence  QLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKK. . . . . . . KASEPGKVIVLVNKVLLVEQLFRKEFQP
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   307..310.........320.........330.........340.........350. ........360.........370.........
 
   109110.........120.........130.........140.........150.........160.........170.........180........
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Query Sequence  LKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSK
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Template Sequence  FLKK. . . . . . . . . . . . WYRVIGLSGLKISFPEVVKSCD. . . IIISTAQILENSLLN. . GVQLSDFSLIIIDECVYNNIMR
Template Known Secondary structure  TT............TS








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   380... ......390.........400..... ....410.........420 .........430.........440..
 
   189190.........200....... ..210......
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Query Sequence  RGAHLALSLERLDALLHTS. . . AQRIGLSAT
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Template Sequence  HYLMQKLKNNRLKKENKPVIPLPQILGLTAS
Template Known Secondary structure  TT








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   460.........470.........480.........490
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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