Job Description P30015 Confidence 96.54% Date Wed Jan 25 15:20:48 GMT 2012 Rank 162 Aligned Residues 169 % Identity 18% Template c2vyeA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:replicative dna helicase; PDBTitle: crystal structure of the dnac-ssdna complex Resolution 4.10 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	K	Q	P	T	A	V	Q	P	Q	T	W	H	V	A	A	R	S	E	H	A	L	V	I	A	P	T	G	S	G	K	T	L	A	A	F	L	Y	A	L	D	R	L	F	R	E	G	G	E	D	T	R	E	A	H	K	R	K	T	S	R	I	L	Y	I	S	P	I	K	A	L	G	T	D	V	Q	R	N	L
Query Conservation
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.											.
Template Sequence		G	I	P	T	G	F	T	E	L	D	R	M	T	S	G	F	Q	R	S	D	L	I	I	V	A	A	R	P	S	V	G	K	T	A	F	A	L	N	I	A	Q	N	V	A	T	K	T	N	E	.	.	.	.	.	.	.	.	.	.	.	.	N	V	A	I	F	S	L	E	M	S	.	A	Q	Q	L	V	M	R	M
Template Known Secondary structure		S	B			S									S	S	B		T	T									S	T	T																T	S		S	.	.	.	.	.	.	.	.	.	.	.	.							S	S	S		.
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.											.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.													.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																																																																				.	.
Query SS confidence																																																																				.	.
Query Sequence		Q	I	P	L	K	G	I	A	D	E	R	R	R	R	G	E	T	E	V	N	L	R	V	G	I	R	T	G	D	T	P	A	Q	E	R	S	K	L	T	R	N	P	P	D	I	L	I	T	T	P	E	S	L	Y	L	M	L	T	S	R	A	R	E	T	L	R	.	.	G	V	E	T	V	I	I	D	E	V	H	A
Query Conservation																																																																				.	.
Alig confidence																						.	.	.	.	.	.	.																																								.	.
Template Conservation																						.	.	.	.	.	.	.
Template Sequence		L	C	A	E	G	N	I	N	A	Q	N	L	R	T	G	K	L	T	P	E	.	.	.	.	.	.	.	D	W	G	K	L	T	M	A	M	G	S	L	S	N	A	G	I	Y	I	D	D	T	P	S	I	R	V	S	D	I	R	A	K	C	R	R	L	K	Q	E	S	G	L	G	M	V	V	I	D	Y	L	Q	L
Template Known Secondary structure							T								T	T						.	.	.	.	.	.	.														T	S								S	S		B															T										G	G	G
Template Predicted Secondary structure																						.	.	.	.	.	.	.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.								.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		184	.						.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.
Predicted Secondary structure				.	.	.	.	.																						.
Query SS confidence				.	.	.	.	.																						.
Query Sequence		V	A	.	.	.	.	.	G	S	K	R	G	A	H	L	A	L	S	L	E	R	L	D	A	L	L	H	T	.	S	A	Q	R	I	G	L	S
Query Conservation				.	.	.	.	.																						.
Alig confidence				.	.	.	.	.																						.
Template Conservation
Template Sequence		I	Q	G	S	G	R	N	R	E	N	R	Q	Q	E	V	S	E	I	S	R	S	L	K	A	L	A	R	E	L	E	V	P	V	I	A	L	S
Template Known Secondary structure		S	B			S			S	S																				T	T	S
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions