Job Description P30015 Confidence 99.96% Date Wed Jan 25 15:20:48 GMT 2012 Rank 72 Aligned Residues 197 % Identity 19% Template c2oxcA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable atp-dependent rna helicase ddx20; PDBTitle: human dead-box rna helicase ddx20, dead domain in complex2 with adp Resolution 1.30 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	V	F	S	P	A	T	R	D	W	F	L	R	A	F	K	Q	P	T	A	V	Q	P	Q	T	W	H	V	A	A	R	S	E	H	A	L	V	I	A	P	T	G	S	G	K	T	L	A	A	F	L	Y	A	L	D	R	L	F	R	E	G	G	E	D	T	R	E	A	H	K	R	K	T	S	R	I	L	Y	I
Query Conservation
Alig confidence																																																																			.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	L	S	R	P	V	L	E	G	L	R	A	A	G	F	E	R	P	S	P	V	Q	L	K	A	I	P	L	G	R	C	G	L	D	L	I	V	Q	A	K	S	G	T	G	K	T	C	V	F	S	T	I	A	L	D	S	L	V	L	E	N	L	S	T	.	.	.	.	.	.	.	.	.	.	Q	I	L	I	L
Template Known Secondary structure		G	T												T	T			S														T	T									T	T	S	S															T	T	S		S		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.											.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	I	K	A	L	G	T	D	V	Q	R	N	L	Q	I	P	L	K	G	I	A	D	E	R	R	R	R	G	E	T	E	V	N	L	R	V	G	I	R	T	G	D	T	P	A	Q	E	R	S	K	L	T	R	N	P	P	D	I	L	I	T	T	P	E	S	L	Y	L	M	L	T	S	R	A	R	E	T	L	R
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template Sequence		A	P	T	R	E	I	A	V	Q	I	H	S	V	I	T	A	I	G	I	K	M	.	.	.	.	.	.	.	.	.	.	.	.	E	G	L	E	C	H	V	F	I	G	G	T	P	L	S	Q	D	K	T	R	L	K	K	C	H	I	A	V	G	S	P	G	R	I	K	Q	L	I	E	.	L	D	Y	L	N	P	G
Template Known Secondary structure			S	S															T	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	T	T								T	T	S									T	T	S		S															.	T	T	S	S		G	G
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.													.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		G	V	E	T	V	I	I	D	E	V	H	A	V	A	G	S	K	.	R	G	A	H	L	A	L	S	L	E	R	L	D	A	L	L	H	T	S	A	Q	R	I	G	L	S	A	T	V	R	S	A	S	D	V	A	A	F	L	G	G	D	R	P	V	T	V
Query Conservation																			.
Alig confidence																			.													.	.	.	.
Template Conservation																																.	.	.	.
Template Sequence		S	I	R	L	F	I	L	D	E	A	D	K	L	L	E	E	G	S	F	Q	E	Q	I	N	W	I	Y	S	S	L	.	.	.	.	P	A	S	K	Q	M	L	A	V	S	A	T	Y	P	E	F	L	A	N	A	L	T	K	Y	M	R	D	P	T	F	V
Template Known Secondary structure		G							S	S						S	T	T	S	S											S	.	.	.	.		S	S								S											T	T	T		S	S
Template Predicted Secondary structure																																.	.	.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.					.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions