Job Description P30015 Confidence 95.73% Date Wed Jan 25 15:20:48 GMT 2012 Rank 179 Aligned Residues 140 % Identity 14% Template c2og2A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:putative signal recognition particle receptor; PDBTitle: crystal structure of chloroplast ftsy from arabidopsis2 thaliana Resolution 2.00 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																																																.	.
Query SS confidence																																																.	.
Query Sequence		A	L	V	I	A	P	T	G	S	G	K	T	L	A	A	F	L	Y	A	L	D	R	L	F	R	E	G	G	E	D	T	R	E	A	H	K	R	K	T	S	R	I	L	Y	I	S	.	.	P	I	K	A	L	G	T	D	V	Q	R	N	L	Q	I	P	L	K	G	I	A	D	E	R	R	R	R	G	E	T	E	V
Query Conservation																																																.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.											.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	M	I	V	G	V	N	G	G	G	K	T	T	S	L	G	K	L	A	H	R	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	G	T	K	V	L	M	A	A	G	D	T	F	R	A	A	A	S	D	Q	L	E	I	W	A	E	R	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	T	S															.	.	.	.	.	.	.	.	.	.	.	.	.		T	T											S																T	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.														.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		N	L	R	V	G	I	R	T	G	D	T	P	A	Q	E	R	S	K	L	T	R	N	P	P	D	I	L	I	T	T	P	E	S	L	Y	L	M	L	T	S	R	A	R	E	T	L	R	G	V	E	T	V	I	I	D	E	V	H	A	V	A	G	S	K	R	G	A	H	L	A	L	S	L	E	R	L	D	A	L	.
Query Conservation																																																																																	.
Alig confidence		.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.																		.
Template Conservation		.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Sequence		.	.	.	C	E	I	V	V	A	E	G	D	K	A	K	A	A	T	V	L	S	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	K	R	G	K	E	E	G	Y	D	V	V	L	C	D	T	S	G	R	.	.	.	L	H	T	N	Y	S	L	M	E	E	L	I	A	C	K	K	A	V
Template Known Secondary structure		.	.	.							S	S	S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T		S										.	.	.	S	S
Template Predicted Secondary structure		.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template SS confidence
					182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200																		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220				.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
							204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																	.	.
Query SS confidence		.	.	.	.	.																	.	.
Query Sequence		.	.	.	.	.	L	H	T	S	A	Q	R	I	G	L	S	A	T	V	R	S	.	.	A	S	D	V	A	A	F	L	G	G	D	R	P	V	T	V	V
Query Conservation		.	.	.	.	.																	.	.
Alig confidence		.	.	.	.	.																	.	.
Template Conservation
Template Sequence		G	K	I	V	S	G	A	P	N	E	I	L	L	V	L	D	G	N	T	G	L	N	M	L	P	Q	A	R	E	F	N	E	V	V	G	I	T	G	L	I
Template Known Secondary structure					S	T	T			S								G	G	G	G	G	G	G											T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions