Job Description P30015 Confidence 99.96% Date Wed Jan 25 15:20:48 GMT 2012 Rank 70 Aligned Residues 191 % Identity 18% Template c2kbeA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent rna helicase dbp5; PDBTitle: solution structure of amino-terminal domain of dbp5p Resolution UNK

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		15	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure											.																				.	.
Query SS confidence											.																				.	.
Query Sequence		F	S	P	A	T	R	D	W	F	.	L	R	A	F	K	Q	P	T	A	V	Q	P	Q	T	W	H	V	A	A	.	.	R	S	E	H	A	L	V	I	A	P	T	G	S	G	K	T	L	A	A	F	L	Y	A	L	D	R	L	F	R	E	G	G	E	D	T	R	E	A	H	K	R	K	T	S	R	I	L	Y	I
Query Conservation											.																				.	.
Alig confidence											.																				.	.																																.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	P	E	L	L	K	G	I	Y	A	M	K	F	Q	K	P	S	K	I	Q	E	R	A	L	P	L	L	L	H	N	P	P	R	N	M	I	A	Q	S	Q	S	G	T	G	K	T	A	A	F	S	L	T	M	L	T	R	V	N	P	E	D	.	.	.	.	.	.	.	.	.	.	A	S	P	Q	A	I	C	L
Template Known Secondary structure		S											S	S	S	S				S									S	S			S	S							S	S	T	T																		T	T	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160											.	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	I	K	A	L	G	T	D	V	Q	R	N	L	Q	I	P	L	K	G	I	A	D	E	R	R	R	R	G	E	T	E	V	N	L	R	V	G	I	R	T	G	D	T	P	A	Q	E	R	S	K	L	T	R	N	P	P	D	I	L	I	T	T	P	E	S	L	Y	L	M	L	T	S	R	A	R	E	T	L	R
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.																					.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.																					.
Template Sequence		A	P	S	R	E	L	A	R	Q	T	L	E	V	V	Q	E	M	G	K	F	T	.	.	.	.	.	.	.	.	.	.	.	.	K	I	T	S	Q	L	I	V	P	D	S	F	E	K	N	.	.	.	.	K	Q	I	N	A	Q	V	I	V	G	T	P	G	T	V	L	D	L	M	R	.	R	K	L	M	Q	L	Q
Template Known Secondary structure			S	S															S	T	T		.	.	.	.	.	.	.	.	.	.	.	.	S							S	T	T		S			S	.	.	.	.	S					S						T	T	T							.	T	T	S			T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.																					.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.													190	.	.	.	.	.	.	.	.	.	200	.	.	.	.					.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																																		.	.
Query SS confidence																																																		.	.
Query Sequence		G	V	E	T	V	I	I	D	E	V	H	A	V	A	G	S	K	R	G	A	H	L	A	L	S	L	E	R	L	D	A	L	L	H	T	S	A	Q	R	I	G	L	S	A	T	V	R	S	.	.	A	S	D	V	A	A	F	L	G	G	D	R	P	V	T	V
Query Conservation																																																		.	.
Alig confidence																				.	.	.																												.	.
Template Conservation																				.	.	.
Template Sequence		K	I	K	I	F	V	L	D	E	A	D	N	M	L	D	Q	Q	G	.	.	.	L	G	D	Q	C	I	R	V	K	R	F	L	P	K	D	T	Q	L	V	L	F	S	A	T	F	A	D	A	V	R	Q	Y	A	K	K	I	V	P	N	A	N	T	L	E	L
Template Known Secondary structure		S															S	T	T	.	.	.												T	T	T	T	S							S														S	T	T	S
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.				250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions