Job Description P30015 Confidence 69.29% Date Wed Jan 25 15:20:48 GMT 2012 Rank 407 Aligned Residues 107 % Identity 21% Template c2gxaA_ PDB info PDB header:replication/dna Chain: A: PDB Molecule:replication protein e1; PDBTitle: crystal structure of papillomavirus e1 hexameric helicase2 with ssdna and mgadp Resolution 3.15 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.								.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.
Query Sequence		P	D	V	F	S	P	A	T	R	D	W	F	L	R	A	F	K	Q	P	T	A	V	Q	P	Q	T	W	H	V	A	A	R	S	E	H	A	L	V	I	A	P	T	G	S	G	K	T	L	A	A	F	L	Y	A	L	D	R	L	F	R	E	G	G	E	D	T	R	E	A	H	K	.	.	.	.	.	.	.	R	K
Query Conservation																																																																									.	.	.	.	.	.	.
Alig confidence														.					.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.																			.	.	.	.	.	.	.
Template Conservation														.					.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Sequence		L	I	T	F	I	N	A	L	K	L	W	L	.	K	G	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	K	N	C	L	A	F	I	G	P	P	N	T	G	K	S	M	L	C	N	.	.	S	L	I	H	F	L	G	G	S	V	L	S	F	A	N	H	K	S	H	F	W	L	A	S	L	A	D
Template Known Secondary structure														.	T	T		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T									S	S	S	S	S							.	.						T	T						T	T	S		T	T	S		T	T	S	G	G	G	T
Template Predicted Secondary structure														.					.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420		.	.	.	.															.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.			.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	R	I	L	Y	I	S	P	I	K	A	L	G	T	D	V	Q	R	N	L	Q	I	P	L	K	G	I	A	D	E	R	R	R	R	G	E	T	E	V	N	L	R	V	G	I	R	T	G	D	T	P	A	Q	E	R	S	K	L	T	R	N	P	P	D	I	L	I	T	T
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	R	A	A	L	V	D	D	A	T	H	A	C	W	R	Y	F	D	T	Y	L	R	N	A	L	D	G	Y	P	V	S	I	D	R	K	H	K	A	A	V	Q	I	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	P	L	L	V	T	S
Template Known Secondary structure			S						S												T	T						S	S							S	S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.																				.	.	.	.	.	520	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions