Return to main results Retrieve Phyre Job Id

Job DescriptionP30015
Confidence97.94%DateWed Jan 25 15:20:48 GMT 2012
Rank147Aligned Residues78
% Identity18%Templatec1pjrA_
PDB info PDB header:helicaseChain: A: PDB Molecule:pcra; PDBTitle: structure of dna helicase
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30.........40.........50.........60.........70.........80.........90.........100..
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  FLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQ
Query Conservation         

  
  
   
  
   

 










 
  
  
                   


 
 


  
  
Alig confidence 

















..


































.........















Template Conservation     
   
   
  

  ..     

 







  
   
  

        ......... 


 
 

 
 
   
Template Sequence  SEQLLAHLNKEQQEAVRT. . TEGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPW. . . . . . . . . NILAITFTNKAAREMR
Template Known Secondary structure  TTS

..
SS

TTS
TT


GG.........GSS
Template Predicted Secondary structure 



..












.........


Template SS confidence 















































































   5....10.........20.. .......30.........40.........50....... ..60.........70...
 
   103......110.
Predicted Secondary structure 
Query SS confidence 








Query Sequence  RNLQIPLKG
Query Conservation    
      
Alig confidence 








Template Conservation   

      
Template Sequence  ERVQSLLGG
Template Known Secondary structure  GG
Template Predicted Secondary structure 

Template SS confidence 








   74.....80..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions