Return to main results Retrieve Phyre Job Id

Job DescriptionP0A968
Confidence47.03%DateThu Jan 5 11:09:29 GMT 2012
Rank48Aligned Residues49
% Identity16%Templated2ba0a1
SCOP infoOB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40. ........50....
Predicted Secondary structure 



















.....




Query SS confidence 






































. . . . .












Query Sequence  KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRT. . . . . LKAGQSVQFDVHQ
Query Conservation   
 

 
   





  
 
  


 
 
 
   
   .....
  
  
 
    
Alig confidence 








...


























.....












Template Conservation   
 
  
  ... 
  
 
     
 
   

              


 
   
  
Template Sequence  IGIIREVAA. . . NGWAVDIYSPYQAFLPVSENPEMKPNKKPNEVLDIGDAIIAKVLN
Template Known Secondary structure 
S...S
SSSS
GGG
TT

TTS
GGGT

TT
Template Predicted Secondary structure 

...



















Template SS confidence 
























































   62.......70 .........80.........90.........100.........110.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions