Return to main results Retrieve Phyre Job Id

Job DescriptionP0A968
Confidence99.69%DateThu Jan 5 11:09:29 GMT 2012
Rank13Aligned Residues68
% Identity25%Templated1wfqa_
SCOP infoOB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50........ .60.........70..
Predicted Secondary structure 





























..






Query SS confidence 
























































. .













Query Sequence  EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKG. . NHASVIVPVEVEAA
Query Conservation    
 

 
   





  
 
  


 
 
 
   
   
  
  
 
      

..  
  
       
Alig confidence 







..
























.




















..













Template Conservation    
 
  
..
  



       




 
    .    
  

 
 
 
    
 

  

 


   
 
Template Sequence  ETGVIEKL. . LTSYGFIQCSERQARLFFHCSQYNG. NLQDLKVGDDVEFEVSSDRRTGKPIAVKLVKISGPSS
Template Known Secondary structure  ..
SSTTTTTTT
SS.
TTT

TT


SSS

SS



Template Predicted Secondary structure  ..










.




















Template SS confidence 








































































   1920...... ...30.........40.........50. ........60.........70.........80........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions