Return to main results Retrieve Phyre Job Id

Job DescriptionP76909
Confidence100.00%DateWed Jan 25 15:21:09 GMT 2012
Rank16Aligned Residues202
% Identity30%Templated1v43a3
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases ABC transporter ATPase domain-like
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  LCVKNVSLRLPESRLLTNVNFTVDKGDIVTLMGPSGCGKSTLFSWMIGALAEQFSCTGELWLNEQRIDILPTAQRQIGIL
Query Conservation 
 
  
         
  

  
  

   
 
 








  
 
         
 
   
            
  
Alig confidence 




















































...























Template Conservation 
    
        

  

  
  


  
 
 








  
 
     ... 
 
   
  
            
Template Sequence  VKLENLTKRFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPT. . . EGRIYFGDRDVTYLPPKDRNISMV
Template Known Secondary structure  TT
TT


TTSSTSS

S...TT
TTS
GGGGT
Template Predicted Secondary structure 



















...









Template SS confidence 















































































   13......20.........30.........40.........50.........60..... ....70.........80.........
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 




















































Query SS confidence 















































































Query Sequence  FQDALLFDQFSVGQNLLLALPATLKGNARRNAVNDALERSGLEGAFHQDPATLSGGQRARVALLRALLAQPKALLLDEPF
Query Conservation   
        

  

                    
    
          

 
 



 

 

   
 







Alig confidence 


......











.

























































Template Conservation     ...... 

 
 
     .                   
          

 
  


 

 

   
 







Template Sequence  FQH. . . . . . MTVYENIAFPLK. KFPKDEIDKRVRWAAELLQIEELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPL
Template Known Secondary structure 

......

TT

.


TT
GGGTTS
TTT

SS
TT

SSTT
Template Predicted Secondary structure 
......





.





















Template SS confidence 















































































   90.. .......100.... .....110.........120.........130.........140.........150.........160..
 
   162.......170.........180.........190......... 200.........210...
Predicted Secondary structure 








.





Query SS confidence 





































.













Query Sequence  SRLDVALRDNFRQWVFSEVRALAIPVVQVTHDLQDVPA. DSSVLDMAQWSENY
Query Conservation    

      
   
       
 


 


 
  
  .   

         
Alig confidence 





































.













Template Conservation   


      
   
  
      


  

         
 
 

  
 
  
Template Sequence  SNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQ
Template Known Secondary structure  TTS
T
S

STT
Template Predicted Secondary structure 












Template SS confidence 




















































   171........180.........190.........200.........210.........220...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions