Return to main results Retrieve Phyre Job Id

Job DescriptionP76909
Confidence97.23%DateWed Jan 25 15:21:09 GMT 2012
Rank130Aligned Residues155
% Identity12%Templated1pzna2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain)
Resolution2.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60.........70.........80.........90 .........100.
Predicted Secondary structure 









































..





Query SS confidence 


































































. .










Query Sequence  VDKGDIVTLMGPSGCGKSTLFSWMIGALAEQFSCTGELWLNEQRIDILPTAQRQIGILFQDALLFDQ. . FSVGQNLLLAL
Query Conservation 
  

   
 
 








  
 
         
 
   
            
  
 
       .. 

  

    
Alig confidence 


























..............

























..










Template Conservation 

 
 
 

 
 





 
 
     ..............                
          
           
Template Sequence  IETQAITEVFGEFGSGKTQLAHTLAVX. . . . . . . . . . . . . . VQLPPEEGGLNGSVIWIDTENTFRPERIREIAQNRGLDP
Template Known Secondary structure  SSSTTSS..............TTS
GGGTS
S
SSS


TTT

Template Predicted Secondary structure 








..............

















Template SS confidence 















































































   128.130.........140.........150.... .....160.........170.........180.........190...
 
   102.......110.........120.........130.........140.........150.........160.........170.........180.
Predicted Secondary structure 









































Query SS confidence 















































































Query Sequence  PATLKGNARRNAVNDALERSGLEGAFHQDPATLSGGQRARVALLRALLAQPKALLLDEPFSRLDVALRDNFRQWVFSEVR
Query Conservation                  
    
          

 
 



 

 

   
 







  

      
   
     
Alig confidence 















































































Template Conservation                                           



 
  
                        
   
 
Template Sequence  DEVLKHIYVARAFNSNHQXLLVQQAEDKIKELLNTDRPVKLLIVDSLTSHFRSEYIGRGALAERQQKLAKHLADLHRLAN
Template Known Secondary structure  GGG

SSSSSSS
TSSTT

STTT
Template Predicted Secondary structure 





















Template SS confidence 















































































   194.....200.........210.........220.........230.........240.........250.........260.........270...
 
   182.......190..
Predicted Secondary structure 



Query SS confidence 










Query Sequence  ALAIPVVQVTH
Query Conservation    
 


 


Alig confidence 










Template Conservation       

    
Template Sequence  LYDIAVFVTNQ
Template Known Secondary structure  TT
Template Predicted Secondary structure 





Template SS confidence 










   274.....280....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions