Job Description P76909 Confidence 97.27% Date Wed Jan 25 15:21:09 GMT 2012 Rank 126 Aligned Residues 154 % Identity 11% Template c2vyeA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:replicative dna helicase; PDBTitle: crystal structure of the dnac-ssdna complex Resolution 4.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	K	G	D	I	V	T	L	M	G	P	S	G	C	G	K	S	T	L	F	S	W	M	I	G	A	L	A	E	Q	F	S	C	T	G	E	L	W	L	N	E	Q	R	I	D	I	L	P	T	A	Q	R	Q	I	G	I	L	F	Q	D	A	L	L	F	D	Q	F	S	V	G	Q	N	L	L	L	A	L	P	A
Query Conservation
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Sequence		F	Q	R	S	D	L	I	I	V	A	A	R	P	S	V	G	K	T	A	F	A	L	N	I	A	Q	N	V	A	T	K	T	N	E	N	V	A	I	F	S	L	E	M	S	A	Q	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	V	M	R	M	L	C	A	E	G	N	I	N	.	.	A	Q	N	L	R	T
Template Known Secondary structure		B		T	T									S	T	T																T	S		S							S	S	S						.	.	.	.	.	.	.	.	.	.	.	.										T			.	.						T
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.													.	.	250	.	.	.	.	.	.	.	.	.			260	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.										.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.
Query Sequence		T	L	K	G	N	A	R	R	N	A	V	N	D	A	L	E	R	S	G	L	E	G	A	F	H	Q	D	P	A	T	L	S	G	G	Q	R	A	R	V	A	L	L	R	A	L	L	A	Q	P	K	A	L	L	L	D	E	P	F	S	R	L	D	.	.	.	.	.	.	.	.	.	V	A	L	R	D	N	F	R	Q
Query Conservation																																																																.	.	.	.	.	.	.	.	.
Alig confidence																																																									.							.	.	.	.	.	.	.	.	.
Template Conservation																																																									.
Template Sequence		G	K	L	T	P	E	D	W	G	K	L	T	M	A	M	G	S	L	S	N	A	G	I	Y	I	D	D	T	P	S	I	R	V	S	D	I	R	A	K	C	R	R	L	K	Q	E	S	G	L	G	M	V	V	I	D	.	Y	L	Q	L	I	Q	G	S	G	R	N	R	E	N	R	Q	Q	E	V	S	E	I	S	R
Template Known Secondary structure		T																			T	S								S	S		B															T									.		G	G	G	S	B			S			S	S
Template Predicted Secondary structure																																																									.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320		.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	V	F	S	E	V	R	A	L	A	I	P	V	V	Q	V	T	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	K	A	L	A	R	E	L	E	V	P	V	I	A	L	S	Q
Template Known Secondary structure										T	T	S
Template Predicted Secondary structure
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions