Job Description P76909 Confidence 97.13% Date Wed Jan 25 15:21:09 GMT 2012 Rank 139 Aligned Residues 110 % Identity 12% Template c2ja1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:thymidine kinase; PDBTitle: thymidine kinase from b. cereus with ttp bound as phosphate2 donor. Resolution 2.8 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	G	D	I	V	T	L	M	G	P	S	G	C	G	K	S	T	L	F	S	W	M	I	G	A	L	A	E	Q	F	S	C	T	G	E	L	W	L	N	E	Q	R	I	D	I	L	P	T	A	Q	R	Q	I	G	I	L	F	Q	D	A	L	L	F	D	Q	F	S	V	G	Q	N	L	L	L	A	L	P	A	T
Query Conservation
Alig confidence																																																																										.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		Q	N	G	W	I	E	V	I	C	G	S	M	F	S	G	K	S	E	E	L	I	R	R	V	R	R	T	Q	F	A	K	Q	H	A	I	V	F	K	P	C	I	D	N	R	Y	S	E	E	D	V	V	S	H	N	G	L	K	V	K	A	V	P	V	S	A	S	K	D	I	F	E	H	.	.	.	.	.	.	.	.
Template Known Secondary structure												S	T	T	S	S															T	T									T	T			S	S		S	S					T	T	S									S	S	G	G	G	G	G	G	G	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	G	N	A	R	R	N	A	V	N	D	A	L	E	R	S	G	L	E	G	A	F	H	Q	D	P	A	T	L	S	G	G	Q	R	A	R	V	A	L	L	R	A	L	L	A	Q	P	K	A	L	L	L	D	E	P	F	S	R	L	D	V	A	L	R	D	N	F	R	Q	W	V	F	S	E	V	R	A	L	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.					.	.	.	.												.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.					.	.	.	.												.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	E	E	L	D	V	I	A	I	D	E	V	.	Q	F	F	D	.	.	.	.	G	D	I	V	E	V	V	Q	V	L	A	.	N	R	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S							S	S	G	.	G	G	S		.	.	.	.	T	T										.		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.					.	.	.	.												.
Template SS confidence
																																													78	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.					.	.	.	.	.	100	.	.	.	.	.		.	.	.
		185	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	V	V	Q	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	R	V	I	V	A	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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