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Job DescriptionP76909
Confidence96.48%DateWed Jan 25 15:21:09 GMT 2012
Rank216Aligned Residues153
% Identity8%Templatec2dflA_
PDB info PDB header:recombinationChain: A: PDB Molecule:dna repair and recombination protein rada; PDBTitle: crystal structure of left-handed rada filament
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60.........70.........80.........90.........100...
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Query Sequence  VDKGDIVTLMGPSGCGKSTLFSWMIGALAEQFSCTGELWLNEQRIDILPTAQRQIGILFQDALLFDQFSVGQNLLLALPA
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Template Sequence  IETRTMTEFFGEFGSGKTQLCHQLSVNVQLPPEKGG. . . . . . . . . . . . . . LSGKAVYIDTEGTFRWE. RIENMAKA. LGL
Template Known Secondary structure  B
TTSSTTSSTTSSS
GGGTS..............
S
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..T
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   104.....110.........120.........130......... 140.........150...... ...160.... ...
 
   104.....110.........120.........130.........140.........150.........160.........170.........180...
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Query Sequence  TLKGNARRNAVNDALERSGLEGAFHQDPATLSGGQRARVALLRALLAQPKALLLDEPFSRLDVALRDNFRQWVFSEVRAL
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Template Sequence  DIDNVMNNIYYIRAINTDHQIAIVDDLQELVSKDPSIKLIVVDSVTSHFRAEYPGRENLAVRQQKLNKHLHQLTRLAEVY
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T

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   168.170.........180.........190.........200.........210.........220.........230.........240.......
 
   184.....190..
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Query Sequence  AIPVVQVTH
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Template Sequence  DIAVIITNQ
Template Known Secondary structure  T
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   248.250......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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