Job Description P76909 Confidence 100.00% Date Wed Jan 25 15:21:09 GMT 2012 Rank 42 Aligned Residues 198 % Identity 23% Template c2cbzA_ PDB info PDB header:transport Chain: A: PDB Molecule:multidrug resistance-associated protein 1; PDBTitle: structure of the human multidrug resistance protein 12 nucleotide binding domain 1 Resolution 1.5 Å

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		2	.	.	.	.	.	.	.	10	.			.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		L	C	V	K	N	V	S	L	R	L	.	.	P	E	S	R	L	L	T	N	V	N	F	T	V	D	K	G	D	I	V	T	L	M	G	P	S	G	C	G	K	S	T	L	F	S	W	M	I	G	A	L	A	E	Q	F	S	C	T	G	E	L	W	L	N	E	Q	R	I	D	I	L	P	T	A	Q	R	Q	I	G
Query Conservation												.	.
Alig confidence												.	.																																											.	.	.										.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	T	V	R	N	A	T	F	T	W	A	R	S	D	P	P	T	L	N	G	I	T	F	S	I	P	E	G	A	L	V	A	V	V	G	Q	V	G	C	G	K	S	S	L	L	S	A	L	L	A	E	M	D	K	.	.	.	V	E	G	H	V	A	I	K	G	.	.	.	.	.	.	.	.	.	.	.	S	V	A
Template Known Secondary structure											S		T	T	S			S										T	T								S	T	T	S	S									T	T		S			.	.	.									S	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																								.	.	.										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		644	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.				.	.	700	.	.	.	.	.	.												.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.						.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.
Query SS confidence																																												.	.	.	.	.
Query Sequence		I	L	F	Q	D	A	L	L	F	D	Q	F	S	V	G	Q	N	L	L	L	A	L	P	A	T	L	K	G	N	A	R	R	N	A	V	N	D	A	L	E	R	S	.	.	.	.	.	G	L	E	G	A	F	H	Q	D	P	A	T	L	S	G	G	Q	R	A	R	V	A	L	L	R	A	L	L	A	Q	P	K	A
Query Conservation																																												.	.	.	.	.
Alig confidence													.																															.	.	.	.	.
Template Conservation													.
Template Sequence		Y	V	P	Q	Q	A	W	I	Q	N	D	.	S	L	R	E	N	I	L	F	G	C	Q	L	E	E	P	Y	Y	R	S	V	I	Q	A	C	A	L	L	P	D	L	E	I	L	P	S	G	D	R	T	E	I	G	E	K	G	V	N	L	S	G	G	Q	K	Q	R	V	S	L	A	R	A	V	Y	S	N	A	D	I
Template Known Secondary structure					S	S					S		.								T	T	S				T	T									T	T						T	T	S	T	T	G	G	G	S			S	T	T	S	B																					S
Template Predicted Secondary structure													.
Template SS confidence
		710	.	.	.	.	.	.	.	.	.	720		.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.			.	.	.	210	.	.	.	.
Predicted Secondary structure																												.																											.	.
Query SS confidence																												.																											.	.
Query Sequence		L	L	L	D	E	P	F	S	R	L	D	V	A	L	R	D	N	F	R	Q	W	V	F	S	E	V	.	R	A	L	A	I	P	V	V	Q	V	T	H	D	L	Q	D	V	P	A	D	S	S	V	L	D	M	.	.	A	Q	W	S	E	N	Y	N
Query Conservation																												.																											.	.
Alig confidence																												.																											.	.
Template Conservation
Template Sequence		Y	L	F	D	D	P	L	S	A	V	D	A	H	V	G	K	H	I	F	E	N	V	I	G	P	K	G	M	L	K	N	K	T	R	I	L	V	T	H	S	M	S	Y	L	P	Q	V	D	V	I	I	V	M	S	G	G	K	I	S	E	M	G	S
Template Known Secondary structure						S	T	T	T	T	S												T	T	S	T	T	S	T	T	T	T	S							S		S	T	T	G	G	G	S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		789	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions