Job Description P76909 Confidence 99.42% Date Wed Jan 25 15:21:09 GMT 2012 Rank 73 Aligned Residues 169 % Identity 13% Template c1u9iA_ PDB info PDB header:circadian clock protein Chain: A: PDB Molecule:kaic; PDBTitle: crystal structure of circadian clock protein kaic with phosphorylation2 sites Resolution 2.80 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	K	G	D	I	V	T	L	M	G	P	S	G	C	G	K	S	T	L	F	S	W	M	I	G	A	L	A	E	Q	F	S	C	T	G	E	L	W	L	N	E	Q	R	I	D	I	L	P	T	A	Q	R	Q	I	G	I	L	F	Q	D	A	L	L	F	D	Q	F	S	V	G	Q	N	L	L	L	A	L	P	A
Query Conservation
Alig confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	I	G	R	S	T	L	V	S	G	T	S	G	T	G	K	T	L	F	S	I	Q	F	L	Y	N	G	I	I	E	F	D	E	P	G	V	F	V	T	F	E	E	T	P	Q	D	I	I	K	N	A	R	S	F	G	W	D	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T	S							S	T	T	S	S																									S	S	S										G	G	G	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.					.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.
Query SS confidence																																																															.	.	.	.
Query Sequence		T	L	K	G	N	A	R	R	N	A	V	N	D	A	L	E	R	S	G	L	E	G	A	F	H	Q	D	P	A	T	L	S	G	G	Q	R	A	R	V	A	L	L	R	A	L	L	A	Q	P	K	A	L	L	L	D	E	P	F	S	R	L	.	.	.	.	D	V	A	L	R	D	N	F	R	Q	W	V	F	S	E
Query Conservation																																																															.	.	.	.
Alig confidence		.	.	.	.	.																																																									.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	K	L	V	D	E	G	K	L	F	I	L	D	A	S	P	D	P	E	G	Q	E	V	V	G	G	F	D	L	S	A	L	I	E	R	I	N	Y	A	I	Q	K	Y	R	A	R	R	V	S	I	D	S	V	T	S	V	F	Q	Q	Y	D	A	S	S	V	V	R	R	E	L	F	R	L	V	A	R
Template Known Secondary structure		.	.	.	.	.					T	T	S										S	S			S			S	S																		T		S							S	T	T	T	S	T	T	T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.											.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.
Query Sequence		V	R	A	L	A	I	P	V	V	Q	V	T	H	D	L	Q	D	V	P	.	.	.	.	.	.	.	.	.	.	A	D	S	S	V	L	D	M	A	Q	W	S	E	N	Y	N	K	L	R
Query Conservation																					.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	Q	I	G	A	T	T	V	M	T	T	E	R	I	E	E	Y	G	P	I	A	R	Y	G	V	E	E	F	V	S	D	N	V	V	I	L	R	N	V	L	E	G	E	R	R	R	R
Template Known Secondary structure						T										S	S	S	S	S		S	S	T	T	S							S										S	T	T
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions