Job Description P76909 Confidence 97.20% Date Wed Jan 25 15:21:09 GMT 2012 Rank 133 Aligned Residues 106 % Identity 17% Template c1sxjA_ PDB info PDB header:replication Chain: A: PDB Molecule:activator 1 95 kda subunit; PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna) Resolution 2.85 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	T	L	M	G	P	S	G	C	G	K	S	T	L	F	S	W	M	I	G	A	L	A	E	Q	F	S	C	T	G	E	L	W	L	N	E	Q	R	I	D	I	L	P	T	A	Q	R	Q	I	G	I	L	F	Q	D	A	L	L	F	D	Q	F	S	V	G	Q	N	L	L	L	A	L	P	A	T	L	K	G	N
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	M	L	Y	G	P	P	G	I	G	K	T	T	A	A	H	L	V	A	Q	E	L	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	L	E	Q	N	A	S	D	V	R	S	K	T
Template Known Secondary structure								S	T	T	S	S												T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.																																										.	.	.	.	.	.	.	380	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	R	N	A	V	N	D	A	L	E	R	S	G	L	E	G	A	F	H	Q	D	P	A	T	L	S	G	G	Q	R	A	R	V	A	L	L	R	A	L	L	A	Q	P	K	A	L	L	L	D	E	P	F	S	R	L	D	V	A	L	R	D	N	F	R	Q	W	V	F	S	E	V	R	A	L	A	I	P	V	V
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Sequence		L	L	N	A	G	V	K	N	A	L	D	N	M	S	V	V	G	Y	F	K	H	Q	N	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	H	F	V	I	I	M	D	E	V	D	G	M	S	.	.	G	G	D	R	G	G	V	G	Q	L	A	Q	F	C	R	K	T	S	T	P	L	I
Template Known Secondary structure						T	G	G	G	G	T	T				S	T	T	T	T	T				S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S							S	G	G	G			.	.	T	T	S	T	T													S	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.																	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.			.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
		189	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	T	H	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	C	N	E
Template Known Secondary structure					S
Template Predicted Secondary structure
Template SS confidence
		453	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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