Job Description P11553 Confidence 62.91% Date Thu Jan 5 11:32:45 GMT 2012 Rank 168 Aligned Residues 68 % Identity 31% Template c3psiA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: crystal structure of the spt6 core domain from saccharomyces2 cerevisiae, form spt6(239-1451) Resolution 3.30 Å

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		12	.	.	.	.	.	.	.	20	.	.						.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.
Query SS confidence													.	.	.	.	.
Query Sequence		K	Q	E	V	I	L	V	L	D	C	G	.	.	.	.	.	A	T	N	V	R	A	I	A	V	N	R	Q	G	K	I	V	A	R	A	S	T	P	N	A	S	D	I	A	M	E	N	N	T	W	H	Q	W	S	L	D	A	I	L	Q	R	F	A	D	C	C	R	Q	I	N	S	E	L	T	E	C	H	I	R	G
Query Conservation													.	.	.	.	.
Alig confidence													.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		K	I	P	K	I	L	S	L	T	C	G	Q	G	R	F	G	A	D	A	I	I	A	V	Y	V	N	R	K	G	D	F	I	R	D	Y	K	I	V	D	N	P	F	D	K	T	N	.	.	.	.	.	.	.	.	.	.	.	.	P	E	K	F	E	D	T	L	D	N	I	I	Q	S	C	Q	P	.	N	A	I	G
Template Known Secondary structure												T	T			T	T	T	T									T	T	S										S		T	T		S	S		.	.	.	.	.	.	.	.	.	.	.	.	S																	.	S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
		746	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.													.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.		.	810	.	.
		87	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	V	T	T	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	N	G	P	N	P
Template Known Secondary structure					S	S	T
Template Predicted Secondary structure
Template SS confidence
		813	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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