Job Description P11553 Confidence 100.00% Date Thu Jan 5 11:32:45 GMT 2012 Rank 18 Aligned Residues 420 % Identity 19% Template c3h6eB_ PDB info PDB header:transferase Chain: B: PDB Molecule:carbohydrate kinase, fggy; PDBTitle: the crystal structure of a carbohydrate kinase from novosphingobium2 aromaticivorans Resolution 2.50 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	Q	E	V	I	L	V	L	D	C	G	A	T	N	V	R	A	I	A	V	N	R	Q	G	K	I	V	A	R	A	S	T	P	N	A	S	D	I	A	M	E	N	N	T	W	H	Q	W	S	L	D	A	I	L	Q	R	F	A	D	C	C	R	Q	I	N	S	E	L	T	E	C	H	I	R	G	I	A	V	T
Query Conservation
Alig confidence																																								.	.	.																												.	.	.	.
Template Conservation																																								.	.	.																												.	.	.	.
Template Sequence		L	S	T	G	A	T	I	V	I	D	L	G	K	T	L	S	K	V	S	L	W	D	L	D	G	R	X	L	D	R	Q	V	R	P	S	I	P	L	.	.	.	E	I	D	G	I	R	R	L	D	A	P	D	T	G	R	W	L	L	D	V	L	S	R	Y	A	D	H	.	.	.	.	P	V	T	T	I	V	P	V
Template Known Secondary structure														S	S									T	T	S														.	.	.			T	T																		G	G	G	T	T	S	.	.	.	.
Template Predicted Secondary structure																																								.	.	.																												.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.				.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.					.	.	.	.	70	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	G	V	D	G	A	L	V	D	K	Q	G	N	L	L	Y	P	I	I	S	W	K	C	P	R	T	A	A	V	M	D	N	I	E	R	L	I	S	A	Q	R	L	Q	A	I	S	G	V	G	A	F	S	F	N	T	L	Y	K	L	V	W	L	K	E	N	H	P	Q	L	L	E	R	A	H	A	W	L	F	I
Query Conservation
Alig confidence												.																																.																																.
Template Conservation												.																																.																																.
Template Sequence		G	H	G	A	G	I	A	A	L	T	.	D	G	R	L	A	F	P	P	L	D	Y	E	Q	S	I	P	E	A	V	X	A	D	Y	R	S	Q	R	D	P	F	A	.	R	T	G	S	P	A	L	P	D	G	L	N	I	G	S	Q	L	W	W	L	D	Q	L	H	P	D	V	X	A	N	A	.	T	L	L	P	W
Template Known Secondary structure				S	S							.	T	T			S	S			B		T	T	S												T	T						.								S	T	T	S	S																		T		.
Template Predicted Secondary structure												.																																.																																.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		S	S	L	I	N	H	R	L	T	G	E	F	T	T	D	I	T	M	.	A	G	T	S	Q	M	L	D	I	Q	Q	R	D	F	S	P	Q	I	L	Q	A	T	G	I	P	R	R	L	F	P	R	L	V	E	A	G	E	Q	I	G	T	L	Q	N	S	A	A	A	M	L	G	L	P	V	G	I	P	V	I	S	A
Query Conservation																				.
Alig confidence																				.																								.	.
Template Conservation																																												.	.
Template Sequence		A	Q	Y	W	A	W	F	L	T	G	R	A	V	S	E	V	T	S	L	G	C	H	S	D	L	W	D	P	Q	D	G	D	F	S	P	X	A	K	R	L	G	W	.	.	A	A	R	F	A	P	I	V	R	A	G	D	T	V	G	A	L	L	P	A	I	A	E	R	T	G	L	S	P	D	V	Q	V	L	A	G
Template Known Secondary structure											S				B						T	T	T		S	S			T	T	T	T										T		.	.	G	G	G	B			B			T	T	S														T			T	T
Template Predicted Secondary structure																																												.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.						.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure															.	.	.	.	.
Query SS confidence															.	.	.	.	.
Query Sequence		G	H	D	T	Q	F	A	L	F	G	A	G	A	.	.	.	.	.	E	Q	N	E	P	V	L	S	S	G	T	W	E	I	L	M	V	R	S	A	Q	V	D	T	S	L	L	S	Q	Y	A	G	S	T	C	E	L	D	S	Q	A	G	L	Y	N	P	G	M	Q	W	L	A	S	G	V	L	E	W	V	R	K	L
Query Conservation															.	.	.	.	.
Alig confidence															.	.	.	.	.
Template Conservation
Template Sequence		L	H	D	S	N	A	A	L	L	A	A	R	G	F	A	E	I	A	D	N	E	A	T	V	L	S	T	G	T	W	F	I	A	X	R	L	P	A	T	P	V	D	T	A	T	L	P	E	A	R	D	C	L	V	N	V	D	V	H	G	R	P	V	P	S	A	R	F	X	G	G	R	E	I	E	T	L	I	E	I
Template Known Secondary structure													T	T	S	T	T	T	T	T	S	S							S	S	S								S	S					T	T			G	G	G	T							T	T	S																				S
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		325	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.							.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure					.																																				.	.	.	.	.	.
Query SS confidence					.																																				.	.	.	.	.	.
Query Sequence		F	W	T	.	A	E	T	P	W	Q	M	L	I	E	E	A	R	L	I	A	P	G	A	D	G	V	K	M	Q	C	D	L	L	S	C	Q	N	A	G	.	.	.	.	.	.	W	Q	G	V	T	L	N	T	T	R	G	H	F	Y	R	A	A	L	E	G	L	T	A	Q	L	Q	R	N	L	Q	M	L	E	K	I
Query Conservation					.																																				.	.	.	.	.	.
Alig confidence					.																																				.	.	.	.	.	.																								.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.
Template Sequence		D	T	R	R	V	D	I	K	P	D	Q	P	A	L	L	A	A	V	P	E	V	L	R	H	G	R	X	I	L	P	T	L	X	R	G	F	G	P	Y	P	H	G	R	F	A	W	I	N	R	P	E	D	W	F	E	R	R	A	A	A	C	L	Y	A	A	L	V	A	.	.	.	.	.	.	D	T	A	L	D	L
Template Known Secondary structure		G	G	G		T	T		G	G	G														T	T					S		S	S	T	T	S	S	S		T	T							S			S	S																	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.							.	.	.	380	.	.
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	F	K	A	S	E	L	L	L	V	G	G	G	S	R	N	T	L	W	N	Q	I	K	A	N	M	L	D	I	P	V	K	V	L	D	D	A	E	T	T	V	A	G	A	A	L	F	G	W	Y	G	V	G
Query Conservation
Alig confidence				.																										.	.
Template Conservation				.																										.	.
Template Sequence		I	G	.	S	T	G	R	I	L	V	E	G	R	F	A	E	A	D	V	F	V	R	A	L	A	S	L	R	.	.	P	D	C	A	V	Y	T	A	N	A	H	S	F	G	A	L	R	L	I	D	P	G	L	R
Template Known Secondary structure		T	T	.			S						S	G	G	G	G													.	.	S	S	S						S				G	G	G						T	T
Template Predicted Secondary structure				.																										.	.
Template SS confidence
		383	.		.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.			410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.