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Job DescriptionP11553
Confidence99.00%DateThu Jan 5 11:32:45 GMT 2012
Rank28Aligned Residues276
% Identity16%Templatec2qm1D_
PDB info PDB header:transferaseChain: D: PDB Molecule:glucokinase; PDBTitle: crystal structure of glucokinase from enterococcus faecalis
Resolution2.02 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........40.........50.........60.........70.........80.........90..
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Query Sequence  QEVILVLDCGATNVRAIAVNRQGKIVARASTPNASDIAMENNTWHQWSLDAILQRFADCCRQINSELTECHIRGIAVTTF
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Template Sequence  DKKIIGIDLGGTTIKFAILTTDGVVQQKWSIETNILE. . . . . . . . . . DGKHIVPSIIESIRHRIDLYNXKKEDFVGIGXG
Template Known Secondary structure  T

SSTT




TT..........TTTTTT

GGG
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   2.......10.........20.........30........ .40.........50.........60.........70.
 
   93......100.........110.........120.........130.........140.........150.........160.........170..
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Query Sequence  GVDGALVDKQGNLLYPIISWKCPRTAAVMDNIERLISAQRLQAISGVGAFSFNTLYKLVWLKENHPQLLERAHAWLFISS
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Template Sequence  TPGSVDIEKGTVVGAYNLNWTTVQP. . . . . . . . . . . VKEQIESALGIPFALD. . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  SSTTTT
BGGGTB
S
B
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S
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   72.......80.........90...... ...100.........110..
 
   173......180.........190.........200.........210.........220.........230.........240.........250..
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Query Sequence  LINHRLTGEFTTDITMAGTSQMLDIQQRDFSPQILQATGIPRRLFPRLVEAGEQIGTLQNSAAAMLGLPVGIPVISAGHD
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ND
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   113.
 
   253...... 260.........270.........280.........290.........300... ......310........
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Query Sequence  TQFALFG. . . . . . AGAEQNEPVLSSGTWEILMVRSAQVDTSLLSQYAGSTCELDSQA. . . . . . . . GLYNPGMQWLASGVL
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Template Conservation                        
  


 
   
  
    
     
  
                   
   
   
 
Template Sequence  ANVAALGERWKGAGENNPDVIFITLGTGVGGGIVAAGKLLHGVAGCAGEVGHVTVDPNGFDCTCGKRGCLETVSSATGVV
Template Known Secondary structure  STTTT
SSSSSTT


SSS
TT
GGGSBS
TTS
B
TTS
BSBTS
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   115....120.........130.........140.........150.........160.........170.........180.........190....
 
   319320..... ....330.........340.........350.........360.........370.........380....
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Query Sequence  EWVRKLF. . . . . . . . . . . . . . WTAETPWQMLIEEARLIAPGADGVKMQCDLLSCQNAGWQGVTLNTTRGHFYRAALEGLT
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Template Sequence  RVARHLSEEFAGDSELKQAIDDGQDVSSKDVFEFAEKGDH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FALXVVDRVC
Template Known Secondary structure  GGG

S

T



T
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   195....200.........210.........220.........230.... .....240....
 
   385....390.........400.........410... ......420..... ....430... ......440.......
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Query Sequence  AQLQRNLQMLEKIGHFKASELLLVGGGSR. NTLWNQIKANML. . . . . . . . . . DIPVKVLD. DAETTVAGAALFGW
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Template Sequence  FYLGLATGNLGNTL. . NPDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLAL
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SSSGGGGTTS
TT

SSGGGGG
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   245....250........ .260.........270.........280.........290.........300.........310.......
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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