Job Description P11553 Confidence 100.00% Date Thu Jan 5 11:32:45 GMT 2012 Rank 6 Aligned Residues 459 % Identity 22% Template c2d4wA_ PDB info PDB header:transferase Chain: A: PDB Molecule:glycerol kinase; PDBTitle: crystal structure of glycerol kinase from cellulomonas sp.2 nt3060 Resolution 2.30 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																																																				.	.
Query SS confidence																																																																				.	.
Query Sequence		E	V	I	L	V	L	D	C	G	A	T	N	V	R	A	I	A	V	N	R	Q	G	K	I	V	A	R	A	S	T	P	N	A	S	D	I	A	M	E	N	N	T	W	H	Q	W	S	L	D	A	I	L	Q	R	F	A	D	C	C	R	Q	I	N	S	E	L	.	.	T	E	C	H	I	R	G	I	A	V	T	T
Query Conservation																																																																				.	.
Alig confidence																																			.	.																																.	.
Template Conservation																																			.	.
Template Sequence		D	Y	V	L	A	I	D	Q	G	T	T	S	S	R	A	I	V	F	D	H	S	G	E	I	Y	S	T	G	Q	L	E	H	D	.	.	Q	I	F	P	R	A	G	W	V	E	H	N	P	E	Q	I	W	N	N	V	R	E	V	V	G	L	A	L	T	R	G	N	L	T	H	E	D	I	A	A	V	G	I	T	N
Template Known Secondary structure											S	S									T	T	S												.	.		B		S	S	T	T																								T	T			G	G	G
Template Predicted Secondary structure																																			.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		92	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure												.																																																																		.	.	.	.
Query SS confidence												.																																																																		.	.	.	.
Query Sequence		F	G	V	D	G	A	L	V	D	K	.	Q	G	N	L	L	Y	P	I	I	S	W	K	C	P	R	T	A	A	V	M	D	N	I	E	R	L	I	S	A	Q	R	L	Q	A	I	S	G	V	G	A	F	S	F	N	T	L	Y	K	L	V	W	L	K	E	N	H	P	Q	L	L	E	R	A	H	A	.	.	.	.
Query Conservation												.																																																																		.	.	.	.
Alig confidence												.																																																																		.	.	.	.
Template Conservation
Template Sequence		Q	R	E	T	A	V	V	W	D	K	T	T	G	K	P	V	Y	N	A	I	V	W	Q	D	T	R	T	Q	K	I	V	D	E	L	G	G	D	E	G	A	E	K	Y	K	S	I	V	G	L	P	L	A	T	Y	F	S	G	P	K	I	K	W	I	L	D	N	V	E	G	A	R	E	K	A	E	K	G	D	L	L
Template Known Secondary structure			S	S		B					T	T	T			B	S	S					T	T			T	T										S	S		G	G	G	G					S			S		T	T	S												S	T	T								T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.						.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																	.	.	.	.	.
Query SS confidence																	.	.	.	.	.
Query Sequence		W	L	F	I	S	S	L	I	N	H	R	L	T	G	E	.	.	.	.	.	F	T	T	D	I	T	M	A	G	T	S	Q	M	L	D	I	Q	Q	R	D	F	S	P	Q	I	L	Q	A	T	G	I	P	R	R	L	F	P	R	L	V	E	A	G	E	Q	I	G	T	L	Q	N	S	A	A	A	M	L	G	L	P
Query Conservation																	.	.	.	.	.
Alig confidence																	.	.	.	.	.																																																				.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.
Template Sequence		F	G	N	T	D	T	W	V	L	W	N	M	T	G	G	T	E	G	G	V	H	V	T	D	V	T	N	A	S	R	T	M	L	M	D	L	D	T	L	S	W	R	E	D	I	A	A	D	M	G	I	P	L	S	M	L	P	D	I	R	S	S	S	E	V	Y	G	H	G	R	P	.	.	.	.	.	R	G	L	V
Template Known Secondary structure														T	T	T	T	T	T											T	T	T	T				T	T	T	T										T	T			G	G	G	S						S									T	.	.	.	.	.	T	S	S	S
Template Predicted Secondary structure																																																																									.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.						.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300			.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.																																							.	.
Query SS confidence																							.																																							.	.
Query Sequence		V	G	I	P	V	I	S	A	G	H	D	T	Q	F	A	L	F	G	A	G	A	.	E	Q	N	E	P	V	L	S	S	G	T	W	E	I	L	M	V	R	S	A	Q	V	D	T	S	L	L	S	Q	Y	A	G	S	T	C	E	L	D	.	.	S	Q	A	G	L	Y	N	P	G	M	Q	W	L	A	S	G	V	L
Query Conservation																							.																																							.	.
Alig confidence																							.																																							.	.
Template Conservation
Template Sequence		P	G	V	P	I	A	G	I	L	G	D	Q	Q	A	A	T	F	G	Q	A	C	F	E	V	G	Q	A	K	N	T	Y	G	T	G	N	F	L	L	L	N	T	G	T	E	K	V	M	S	K	N	G	L	L	T	T	V	C	Y	K	I	G	D	A	P	A	V	Y	A	L	E	G	S	I	A	V	T	G	S	L	V
Template Known Secondary structure		T	T																	T	T			S	T	T							S	S	S								T	T	S					S	S	S										T	T	S											S		S
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.									.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure																																														.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.
Query Sequence		E	W	V	R	K	L	F	W	T	A	E	T	P	W	Q	M	L	I	E	E	A	R	L	I	A	P	G	A	D	G	V	K	M	Q	C	D	L	L	S	C	Q	N	A	G	.	.	.	.	.	.	.	.	W	Q	G	V	T	L	N	T	T	R	G	H	F	Y	R	A	A	L	E	G	L	T	A	Q	L	Q	R	N
Query Conservation																																														.	.	.	.	.	.	.	.
Alig confidence																	.	.																												.	.	.	.	.	.	.	.
Template Conservation																	.	.
Template Sequence		Q	W	L	R	D	N	L	G	M	F	E	D	A	P	D	.	.	V	E	W	L	A	G	K	V	Q	D	N	G	G	A	Y	F	V	P	A	F	S	G	L	F	A	P	Y	W	R	P	D	A	R	G	A	L	V	G	L	T	R	Y	V	N	R	N	H	I	A	R	A	A	L	E	A	T	A	F	Q	S	R	E	V
Template Known Secondary structure							T	T		T	T	T	T		S		.	.	T					T	T	S	S	S		T	T						T	T				S	T	T	T					S									S	S
Template Predicted Secondary structure																	.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330			.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	M	L	E	K	I	G	H	F	K	A	S	E	L	L	L	V	G	G	G	S	R	N	T	L	W	N	Q	I	K	A	N	M	L	D	I	P	V	K	V	L	D	D	A	E	T	T	V	A	G	A	A	L	F	G	W	Y	G	V	G	E	F	N	S	P	E	E	A	R	A	Q	I	H	Y	Q	Y	R	Y	F
Query Conservation
Alig confidence																																																																													.
Template Conservation																																																																													.
Template Sequence		V	D	A	M	N	A	D	S	G	V	D	L	T	E	L	R	V	D	G	G	M	V	A	N	E	L	L	M	Q	F	Q	A	D	Q	L	G	V	D	V	V	R	P	K	V	A	E	T	T	A	L	G	A	A	Y	A	A	G	I	A	V	G	F	W	K	G	E	Q	D	V	I	D	N	W	A	E	.	D	K	R	W
Template Known Secondary structure										S										S	G	G	G	G													T	S						S		S																T	S	S		S											.
Template Predicted Secondary structure																																																																													.
Template SS confidence
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.		.	470	.	.
		471	.	.	.	.	.	.	.	.	480	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	P	Q	T	E	P	E	F	I	E	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	P	S	M	E	S	G	E	R	E	R	L
Template Known Secondary structure					S
Template Predicted Secondary structure
Template SS confidence
		473	.	.	.	.	.	.	480	.	.	.	.