Job Description P11553 Confidence 34.15% Date Thu Jan 5 11:32:45 GMT 2012 Rank 197 Aligned Residues 59 % Identity 8% Template c1yj5B_ PDB info PDB header:transferase Chain: B: PDB Molecule:5' polynucleotide kinase-3' phosphatase catalytic domain; PDBTitle: molecular architecture of mammalian polynucleotide kinase, a dna2 repair enzyme Resolution 2.80 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	N	V	R	A	I	A	V	N	R	Q	G	K	I	V	A	R	A	S	T	P	N	A	S	D	I	A	M	E	N	N	T	W	H	Q	W	S	L	D	A	I	L	Q	R	F	A	D	C	C	R	Q	I	N	S	E	L	T	E	C	H	I	R	G	I	A	V	T	T	F	G
Query Conservation
Alig confidence																						.	.	.																		.	.	.	.	.											.	.	.	.
Template Conservation																						.	.	.																		.	.	.	.	.											.	.	.	.
Template Sequence		K	P	Q	G	K	V	A	A	F	D	L	D	G	T	L	I	T	T	R	S	.	.	.	G	K	V	F	P	T	S	P	S	D	W	R	I	L	Y	P	E	.	.	.	.	.	I	P	K	K	L	Q	E	L	A	A	.	.	.	.	E	G	Y	K	L	V	I	F	T	N	Q	X
Template Known Secondary structure					S							S	B	T	T	T				S	S	.	.	.		S	S	S		S	S	T	T					S		T	T	.	.	.	.	.											.	.	.	.	T	T
Template Predicted Secondary structure																						.	.	.																		.	.	.	.	.											.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.						.	.	200	.	.	.	.	.	.	.					.	.	210	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions