Return to main results Retrieve Phyre Job Id

Job DescriptionP31808
Confidence100.00%DateThu Jan 5 11:48:45 GMT 2012
Rank51Aligned Residues242
% Identity17%Templated2pd4a1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.. .......30.........40.........50.........60.........70.........80.....
Predicted Secondary structure 









..



















Query SS confidence 














. .






























































Query Sequence  DLLNDRIILVTGASD. . GIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQR
Query Conservation    
 

 






 ..


 


  

  

 


  
           
                             
Alig confidence 














..



























.

































Template Conservation    
 

 







  


 
 
  

  

 
 
  
      .                 
                
Template Sequence  GFLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEK. RVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKK
Template Known Secondary structure 
TTTT



STTSTTT
SSTTT.TT




TT
Template Predicted Secondary structure 

















.














Template SS confidence 















































































   2.......10.........20.........30.........40...... ...50.........60.........70.........80
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
Predicted Secondary structure 






























































Query SS confidence 















































































Query Sequence  IAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAY
Query Conservation                                                               

   
            
Alig confidence 
























































..




















Template Conservation          
  

                                            ..   
  

            
Template Sequence  DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNG. . ASVLTLSYLGSTKYMAHYNVM
Template Known Secondary structure  TS






GGGGSS
GGG

TGGG..
GGGTS

TT
Template Predicted Secondary structure 





































..












Template SS confidence 















































































   81........90.........100.........110.........120.........130....... ..140.........150........
 
   166...170.........180.. .......190.........200........ .210.........220.........230....
Predicted Secondary structure  .















..........










Query SS confidence 
















.

























. . . . . . . . . .

























Query Sequence  AASKFATEGMMQVLADE. YQQRLRVNCINPGGTRTAMRASAFPT. . . . . . . . . . EDPQKLKTPADIMPLYLWLMGDDSRR
Query Conservation   


          
 
.    



 
 

 
 
 
       ..........    
   
 


  
 

 
  
  
Alig confidence 
















.

























..........

























Template Conservation   


 
        
       
 

 
 

 
 
                    

 
   




  
 

 
  
  
Template Sequence  GLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSG
Template Known Secondary structure  TTT





TTGGGSTTSTTSS


SGGGTT
Template Predicted Secondary structure 































Template SS confidence 















































































   159160.........170.........180.........190.........200.........210.........220.........230........
 
   235....240........ .250..
Predicted Secondary structure 









.



Query SS confidence 













.



Query Sequence  KTGMTFDAQPGRKP. GISQ
Query Conservation 


  
 



   .    
Alig confidence 













.



Template Conservation 


  
 



        
Template Sequence  VSGEVHFVDAGYHVMGMGA
Template Known Secondary structure 

S
STTGGG
SS

Template Predicted Secondary structure 











Template SS confidence 


















   239240.........250.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions