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Job DescriptionP31808
Confidence100.00%DateThu Jan 5 11:48:45 GMT 2012
Rank15Aligned Residues243
% Identity26%Templatec3rihB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:short chain dehydrogenase or reductase; PDBTitle: crystal structure of a putative short chain dehydrogenase or reductase2 from mycobacterium abscessus
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  PKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQ
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Template Sequence  KVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG. . AGNVIGVRLDVSDPGSCADAAR
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TT

TT
TTTTSTT
SSGGGGTTSS..SS


TT
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   12.......20.........30.........40.........50.........60....... ..70.........80.........
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
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Query Sequence  RIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGA
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Template Sequence  TVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSH
Template Known Secondary structure  S











TTT

TTSS


SBTTTB

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   90.........100.........110.........120.........130.........140.........150.........160.........
 
   165....170.........180.. .......190.........200....... ..210.........220.........230.....
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Query Sequence  YAASKFATEGMMQVLADE. YQQRLRVNCINPGGTRTAMRASAFP. . . . . . . . TEDPQKLKTPADIMPLYLWLMGDDSRRK
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Template Sequence  YGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPMGMLGSPVDIGHLAAFLATDEAGYI
Template Known Secondary structure  GGGT

SB

TT
TT
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B
SGGGTT
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   170.........180.........190.........200.........210.........220.........230.........240.........
 
   236...240.........
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Query Sequence  TGMTFDAQPGRKPG
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Template Sequence  TGQAIVVDGGQVLP
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STTTT

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   250.........260...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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