Job Description P31808 Confidence 100.00% Date Thu Jan 5 11:48:45 GMT 2012 Rank 134 Aligned Residues 228 % Identity 23% Template c3qljB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:short chain dehydrogenase; PDBTitle: crystal structure of a short chain dehydrogenase from mycobacterium2 avium Resolution 1.80 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.											.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		D	L	L	N	D	R	I	I	L	V	T	G	A	S	D	G	I	G	R	E	A	A	M	T	Y	A	R	Y	G	A	T	V	I	L	L	G	R	N	.	.	.	.	.	.	.	.	.	.	E	E	K	L	R	Q	V	A	S	H	I	N	E	E	T	G	R	Q	P	Q	W	F	I	L	D	L	L	T	C	T	S	E
Query Conservation																																								.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	V	V	D	G	R	V	V	I	V	T	G	A	G	G	G	I	G	R	A	H	A	L	A	F	A	A	E	G	A	R	V	V	V	N	D	I	G	V	G	L	D	G	S	P	A	S	G	G	S	A	A	Q	S	V	V	D	E	I	T	A	A	G	G	E	A	V	A	D	G	S	N	V	A	D	W	D	Q	A	A
Template Known Secondary structure			T	T	T	T						T	T	T	T	S													T	T										B		T	T	S	S	B	T		T	T	S												T	T										T	T	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		N	C	Q	Q	L	A	Q	R	I	A	V	N	Y	P	R	L	D	G	V	L	H	N	A	G	L	L	G	D	V	C	P	M	S	E	Q	N	P	Q	V	W	Q	D	V	M	Q	V	N	V	N	A	T	.	.	F	M	L	T	Q	A	L	L	P	L	L	L	K	S	D	A	G	S	L	V	F	T	S	S	S	V	G
Query Conservation																																																					.	.
Alig confidence																																																					.	.
Template Conservation
Template Sequence		G	L	I	Q	T	A	V	E	T	F	G	G	L	D	V	L	V	N	N	A	G	I	V	R	D	R	M	I	A	N	T	S	E	E	E	F	D	A	V	I	A	V	H	L	K	G	H	F	A	T	M	R	H	A	A	A	Y	W	R	G	L	S	K	A	G	K	A	V	D	G	R	I	I	N	T	S	S	G	A	G
Template Known Secondary structure												S															B		G	G	G																																		T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		R	Q	G	R	A	N	W	G	A	Y	A	A	S	K	F	A	T	E	G	M	M	Q	V	L	A	D	E	.	Y	Q	Q	R	L	R	V	N	C	I	N	P	G	G	T	R	T	A	M	R	A	S	A	F	P	T	E	D	P	Q	K	L	K	T	P	A	D	I	M	P	L	Y	L	W	L	M	G	D	D	S	R	R
Query Conservation																													.
Alig confidence																													.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Q	G	S	V	G	Q	G	N	Y	S	A	A	K	A	G	I	A	T	L	T	L	V	G	A	A	E	M	G	R	Y	G	V	T	V	N	A	I	A	P	S	A	R	T	R	.	.	.	.	.	.	.	.	.	.	.	.	F	D	A	M	A	P	E	N	V	S	P	L	V	V	W	L	G	S	A	E	A	R	D
Template Known Secondary structure					B	T	T	B																						G	G	G	T										T	T			.	.	.	.	.	.	.	.	.	.	.	.			T	T		G	G	G	T								T	S	G	G	G	T	T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.													.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	G	M	T	F	D	A	Q	P	G	R	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	G	K	V	F	E	V	E	G	G	K	I
Template Known Secondary structure				S							T	T
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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