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Job DescriptionP31808
Confidence99.97%DateThu Jan 5 11:48:45 GMT 2012
Rank168Aligned Residues197
% Identity25%Templatec3qivA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:short-chain dehydrogenase or 3-oxoacyl-[acyl-carrier- PDBTitle: crystal structure of a putative short-chain dehydrogenase or 3-2 oxoacyl-[acyl-carrier-protein] reductase from mycobacterium3 paratuberculosis atcc baa-968 / k-10
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.........80........
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Query Sequence  LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV
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Template Sequence  RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGT. AISVAVDVSDPESAKAMADRTLAEF
Template Known Secondary structure  TTTT
TTTSTT
S
TT
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TTS
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   2.......10.........20.........30.........40.........50..... ....60.........70.........80
 
   8990.........100.........110.........120.........130.........140.........150.........160........
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Query Sequence  NYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAAS
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Template Sequence  GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQ. . . . . . . . . . . . . . SSLA
Template Known Secondary structure  S








GGGGG
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   81........90.........100.........110.........120.........130.........140.. ....
 
   169170.........180.. .......190.........200.........210.........220.........230.........240..
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Query Sequence  KFATEGMMQVLADE. YQQRLRVNCINPGGTRTAMRASAFPTEDPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDA
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Template Sequence  KVGINGLTQQLSRELGGRNIRINAIAPP. . . . . . . . . . . . . . . . . . . . . . DDLVGMCLFLLSDEASWITGQIFNV
Template Known Secondary structure  TTTTT

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SGGGTT

S

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   158.160.........170.........180..... ....190.........200.........210
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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