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Job DescriptionP31808
Confidence100.00%DateThu Jan 5 11:48:45 GMT 2012
Rank25Aligned Residues242
% Identity19%Templatec3ijrF_
PDB info PDB header:oxidoreductaseChain: F: PDB Molecule:oxidoreductase, short chain dehydrogenase/reductase family; PDBTitle: 2.05 angstrom resolution crystal structure of a short chain2 dehydrogenase from bacillus anthracis str. 'ames ancestor' in complex3 with nad+
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  QPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLA
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Template Sequence  YKGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQE
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STTTT
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   36...40.........50.........60.........70.........80.........90.........100.........110.....
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  QRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWG
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Template Sequence  TVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVT. . . . KAALSHLKQGDVIINTASIVAYEGNETLI
Template Known Secondary structure  S










SSGGG

T....TT

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T

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   116...120.........130.........140.........150.........160.. .......170.........180.........190.
 
   164.....170.........180.. .......190.........200.. .......210.........220.........230...
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Query Sequence  AYAASKFATEGMMQVLADE. YQQRLRVNCINPGGTRTAMR. . . . . . . . . ASAFPTEDPQKLKTPADIMPLYLWLMGDDSR
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Template Sequence  DYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPXQRPGQPYELAPAYVYLASSDSS
Template Known Secondary structure  GGGT

SB
STTTTTTS
TTTTTTSTTSS
B
GGGTSGGGT
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   192.......200.........210.........220.........230.........240.........250.........260.........270.
 
   234.....240.........
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Query Sequence  RKTGMTFDAQPGRKPG
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Template Sequence  YVTGQXIHVNGGVIVN
Template Known Secondary structure  T

S
SSS



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   272.......280.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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