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Job DescriptionP31808
Confidence100.00%DateThu Jan 5 11:48:45 GMT 2012
Rank60Aligned Residues238
% Identity26%Templatec3ftpD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:3-oxoacyl-[acyl-carrier protein] reductase; PDBTitle: crystal structure of 3-ketoacyl-(acyl-carrier-protein)2 reductase from burkholderia pseudomallei at 2.05 a3 resolution
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80......
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Query Sequence  QDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRI
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Template Sequence  DKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKE
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TTTT
S
SSTT
SST




TT
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   87..90.........100.........110.........120.........130.........140.........150.........160......
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Query Sequence  AVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYA
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Template Sequence  FG. . . . ALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYA
Template Known Secondary structure  S....











GGG

TT



T

TT
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   82. ......90.........100.........110.........120.........130.........140.........150.......
 
   167..170.........180.. .......190.........200......... 210.........220.........230.........240....
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Query Sequence  ASKFATEGMMQVLADE. YQQRLRVNCINPGGTRTAMRASAFPTE. DPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQP
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Template Sequence  AAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGTTLHVNG
Template Known Secondary structure  GGGT

SB




T
TT
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B
SGGGTT

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ST
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   158.160.........170.........180.........190.........200.........210.........220.........230.......
 
   245...
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Query Sequence  GRKP
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Template Sequence  GMFM
Template Known Secondary structure  TSS
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   245...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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