Job Description P31808 Confidence 98.96% Date Thu Jan 5 11:48:45 GMT 2012 Rank 220 Aligned Residues 199 % Identity 13% Template c3dqpA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:oxidoreductase ylbe; PDBTitle: crystal structure of the oxidoreductase ylbe from2 lactococcus lactis, northeast structural genomics3 consortium target kr121. Resolution 1.40 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	I	L	V	T	G	A	S	D	G	I	G	R	E	A	A	M	T	Y	A	R	Y	G	A	T	V	I	L	L	G	R	N	E	E	K	L	R	Q	V	A	S	H	I	N	E	E	T	G	R	Q	P	Q	W	F	I	L	D	L	L	T	C	T	S	E	N	C	Q	Q	L	A	Q	R	I	A	V	N	Y	P	R
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	K	I	F	I	V	G	S	T	G	R	V	G	K	S	L	L	K	S	L	S	T	T	D	Y	Q	I	Y	A	G	A	R	K	V	E	Q	V	P	Q	.	.	.	.	.	.	.	.	.	.	.	Y	N	N	V	K	A	V	H	F	D	V	D	W	T	P	E	E	X	A	K	Q	L	H	G	X	D	A	I	I	N
Template Known Secondary structure								S	T	T	S											T	T	S	S								S	S	G	G	G	S			.	.	.	.	.	.	.	.	.	.	.		T	T								T	T	S							T	T	T	T	T		S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.												40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	G	V	L	H	N	A	G	L	L	G	D	V	C	P	M	S	E	Q	N	P	Q	V	W	Q	D	V	M	Q	V	N	V	N	A	T	F	M	L	T	Q	A	L	L	P	L	L	L	K	S	D	A	G	S	L	V	F	T	S	S	S	V	G	R	Q	G	R	A	N	W	G	A	Y	A	A	S	K	F	A	T
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	G	G	K	S	L	L	K	V	D	L	Y	G	A	V	K	L	X	Q	A	A	E	K	A	E	V	K	R	F	I	L	L	S	T	I	F	S	L	Q	P	E	K	W	I	G	A	G	F	D	A	L	K	D	Y	Y	I
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	S	S																			T	T										T	T	T	T		G	G	G			S						T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		70	.																						.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		E	G	M	M	Q	V	L	A	D	E	Y	Q	Q	R	L	R	V	N	C	I	N	P	G	G	T	R	T	A	M	R	A	S	A	F	P	T	E	D	P	Q	K	.	L	K	T	P	A	D	I	M	P	L	Y	L	W	L	M	G	D	D	S	R	R	K	T	G	M	T	F	D	A	Q	P	G
Query Conservation																																											.
Alig confidence																																											.																				.	.
Template Conservation																																																															.	.
Template Sequence		A	K	H	F	A	D	L	Y	L	T	K	E	T	N	L	D	Y	T	I	I	Q	P	G	A	L	T	E	E	E	A	T	G	L	I	D	I	N	D	E	V	S	A	S	N	T	I	G	D	V	A	D	T	I	K	E	L	V	X	T	D	H	.	.	S	I	G	K	V	I	S	X	H	N	G
Template Known Secondary structure													S												S				S				S					S	S	S																			T		G	G	.	.	G	T	T
Template Predicted Secondary structure																																																															.	.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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