 |
Job Description | P31808 | Confidence | 95.49% | Date | Thu Jan 5 11:48:45 GMT 2012 |
Rank | 459 | Aligned Residues | 63 |
% Identity | 16% | Template | c3donA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:shikimate dehydrogenase; |
PDBTitle: crystal structure of shikimate dehydrogenase from staphylococcus2 epidermidis
|
Resolution | 2.10 Å |
|
 |
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | |
. | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | N | D | R | I | I | L | V | T | G | A | S | D | G | I | G | R | E | A | A | M | T | Y | A | R | Y | G | A | . |
T | V | I | L | L | G | R | N | E | E | K | L | R | Q | V | A | S | H | I | N | E | E | T | G | R | Q | P | Q | W | F | I | L | D | L | L | T |
Query Conservation |   |
|   |
|
|   |
|
|
|
|
|
|
|   |
|
|
|   |
|
|
|   |   |
|
|   |   |
|
| . |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|
|
|
|
| . |
|
|
|   |
|   |
|
|   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |
|
|
|   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
Template Sequence |   |
I | E | D | A | Y | I | L | I | L | G | . |
A | G | G | A | S | K | G | I | A | N | E | L | Y | K | I | V | R | P | T | L | T | V | A | N | R | T | M | S | R | F | N | N | W | S | L | N | I | N | K | I | N | L | S | H | A | E | S | H | L | D | E | F | D | I |
Template Known Secondary structure |   |
G | G | G |
|
|  |  |  |  |
| . |
| S |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |
|
|  |  |  |
| S |
| G | G | G | G | T | T |
|
| S |
|
|  |  |  |
|  |  |  |  |  |  | T | G | G | G |
| S |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
115 | . | . | . | . | 120 | . | . | . | . | |
. | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|