Return to main results Retrieve Phyre Job Id

Job DescriptionP31808
Confidence99.24%DateThu Jan 5 11:48:45 GMT 2012
Rank212Aligned Residues207
% Identity13%Templatec3ay3C_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:nad-dependent epimerase/dehydratase; PDBTitle: crystal structure of glucuronic acid dehydrogeanse from2 chromohalobacter salexigens
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........40.........50.........60.........70.........80.........90..
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  RIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPR
Query Conservation 
 






 


 


  

  

 


  
           
                                    
Alig confidence 

































............


























.......
Template Conservation 









 

  
   
   
  
    
  ............             

 
          .......
Template Sequence  NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVD. . . . . . . . . . . . LGAAEAHEEIVACDLADAQAVHDLVKD. . . . . . .
Template Known Secondary structure  TTTSGGGGGGG

SS
............




TT



TT
TT.......
Template Predicted Secondary structure 










............














.......
Template SS confidence 















































































   3......10.........20.........30...... ...40.........50.........60...
 
   93......100.........110.........120.........130.........140.........150.........160.........170..
Predicted Secondary structure 


























































Query SS confidence 















































































Query Sequence  LDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFAT
Query Conservation                                                        

   
            
 


   
Alig confidence  .














































































Template Conservation  .                                          
  

              
         
  

   
Template Sequence  . CDGIIHLGGVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFG
Template Known Secondary structure  .
S

S

S


TTT

GGGSTTSBTTS
TTS




S
Template Predicted Secondary structure  .





































Template SS confidence 















































































   64.....70.........80.........90.........100.........110.........120.........130.........140..
 
   173......180.........190.........200.........210.........220.........230.........240.......
Predicted Secondary structure 



































Query SS confidence 










































































Query Sequence  EGMMQVLADEYQQRLRVNCINPGGTRTAMRASAFPTEDPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPGRK
Query Conservation         
 
    



 
 

 
 
 
           
   
 


  
 

 
  
  


  
 



  
Alig confidence 










..














....























..
















Template Conservation 
          ..

    

   
 
 ....          
   
 
      
..                 
Template Sequence  EDLASLYYHKF. . DIETLNIRIGSCFPK. . . . PKDARMMATWLSVDDFMRLMKRAF. . VAPKLGCTVVYGASANT
Template Known Secondary structure  TT..



B
SSS....

STTB

..
S




S
S
Template Predicted Secondary structure  ..








....








..










Template SS confidence 










































































   143......150... ......160........ .170.........180.........190.. .......200.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions