Return to main results Retrieve Phyre Job Id

Job DescriptionP31808
Confidence100.00%DateThu Jan 5 11:48:45 GMT 2012
Rank41Aligned Residues233
% Identity26%Templatec3ak4C_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:nadh-dependent quinuclidinone reductase; PDBTitle: crystal structure of nadh-dependent quinuclidinone reductase from2 agrobacterium tumefaciens
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.........50.........60.........70.........80.........
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN
Query Conservation 
 

 






 


 


  

  

 


  
           
                                 
Alig confidence 
















































......
























Template Conservation 
 

 






 


 
 
  

  
  


  
           
  ......                         
Template Sequence  LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLEN. . . . . . GGFAVEVDVTKRASVDAAMQKAIDA
Template Known Secondary structure 
TT
TTTSTT
S
T
TT......


TT
Template Predicted Secondary structure 














......











Template SS confidence 















































































   7..10.........20.........30.........40.........50..... ....60.........70.........80
 
   90.........100.........110.........120.........130.........140.........150.........160.........
Predicted Secondary structure 





























































Query SS confidence 















































































Query Sequence  YPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASK
Query Conservation                                                           

   
            
 


Alig confidence 















































































Template Conservation                                                                
            
 


Template Sequence  LGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASK
Template Known Secondary structure  TS










GGG

TT




GGGTS

TT
Template Predicted Secondary structure 





















































Template SS confidence 















































































   81........90.........100.........110.........120.........130.........140.........150.........160
 
   170.........180.. .......190.........200.. .......210.........220.........
Predicted Secondary structure  .













...................










Query SS confidence 












.



















. . . . . . . . . . . . . . . . . . .


























Query Sequence  FATEGMMQVLADE. YQQRLRVNCINPGGTRTAMR. . . . . . . . . . . . . . . . . . . ASAFPTEDPQKLKTPADIMPLYLWLMG
Query Conservation            
 
.    



 
 

 
 
 
 ...................          
   
 


  
 

 
Alig confidence 












.



















...................


























Template Conservation            
       
 
  
 

 
 
                             
  
   
 


  
  
 
Template Sequence  FAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLAS
Template Known Secondary structure  GGGT

SB
ST

T
TT
S
B
S
Template Predicted Secondary structure 




























Template SS confidence 















































































   161........170.........180.........190.........200.........210.........220.........230.........240
 
   230.........240........
Predicted Secondary structure 











Query SS confidence 


















Query Sequence  DDSRRKTGMTFDAQPGRKP
Query Conservation    
  


  
 



   
Alig confidence 


















Template Conservation    
  


  
 



  
Template Sequence  DAARFMTGQGINVTGGVRM
Template Known Secondary structure  GGGTT

S
SSSSS
Template Predicted Secondary structure 









Template SS confidence 


















   241........250.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions