Job Description P31808 Confidence 98.55% Date Thu Jan 5 11:48:45 GMT 2012 Rank 239 Aligned Residues 222 % Identity 9% Template c2z1mC_ PDB info PDB header:lyase Chain: C: PDB Molecule:gdp-d-mannose dehydratase; PDBTitle: crystal structure of gdp-d-mannose dehydratase from aquifex aeolicus2 vf5 Resolution 2.00 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	I	I	L	V	T	G	A	S	D	G	I	G	R	E	A	A	M	T	Y	A	R	Y	G	A	T	V	I	L	L	G	R	N	E	E	K	L	R	Q	V	A	S	H	I	N	E	E	T	G	R	Q	P	Q	W	F	I	L	D	L	L	T	C	T	S	E	N	C	Q	Q	L	A	Q	R	I	A	V	N	Y	P
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.
Template Sequence		G	K	R	A	L	I	T	G	I	R	G	Q	D	G	A	Y	L	A	K	L	L	L	E	K	G	Y	E	V	Y	G	A	D	S	W	R	L	K	E	L	G	.	.	.	.	.	.	.	.	.	.	I	E	N	D	V	K	I	I	H	M	D	L	L	E	F	S	N	I	I	R	T	I	E	K	V	Q	P	D	E	V
Template Known Secondary structure									T	T	T	S													T	T														T	T	.	.	.	.	.	.	.	.	.	.		T	T	T	S							T	T															S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.											.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	D	G	V	L	H	N	A	G	L	L	G	D	V	C	P	M	S	E	Q	N	P	Q	V	W	Q	D	V	M	Q	V	N	V	N	A	T	F	M	L	T	Q	A	L	L	P	L	L	L	K	S	D	A	G	S	L	V	F	T	S	S	S	V	G	R	Q	G	R	A	N	W	G	A	Y	A	A	S	K	F	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	N	L	A	A	Q	S	F	V	G	V	S	F	E	Q	P	I	L	T	A	E	V	D	A	I	G	V	L	R	I	L	E	A	L	R	T	V	K	P	D	T	K	F	Y	Q	A	S	T	S	E	M	F	G	K	V	Q	E	I	P	Q	T	E	K	T	P	F	Y	P	R	S	P	Y	A	V	A	K	L	F	G	H
Template Known Secondary structure																S									T															T	T									G	G	G	T		S		S	S	S	S	B		T	T	S						S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200											.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.										.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Query Sequence		T	E	G	M	M	Q	V	L	A	D	E	Y	Q	Q	R	L	R	V	N	C	I	N	P	G	G	T	R	T	A	.	.	.	.	.	.	.	.	.	.	M	R	A	S	A	F	P	T	E	D	P	Q	K	L	K	T	.	.	.	.	.	.	.	.	.	P	A	D	I	M	P	L	Y	L	W	L	M	G	D	D	S
Query Conservation																															.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.																.
Template Conservation																																																																																	.
Template Sequence		W	I	T	V	N	Y	R	E	A	Y	N	M	F	A	C	S	G	I	L	F	N	H	E	S	P	L	R	G	I	E	F	V	T	R	K	I	T	Y	S	L	A	R	I	K	Y	G	L	Q	D	K	L	V	L	G	N	L	N	A	K	R	D	W	G	Y	A	P	E	Y	V	E	A	M	W	L	M	M	Q	Q	P	.
Template Known Secondary structure																										T	T	S		T	T	S														T	T	S		S					S		T	T																				T	S	S	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	K	T	G	M	T	F	D	A	Q	P	G	R	K
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	E	P	D	D	Y	V	I	A	T	G	E	T
Template Known Secondary structure		.	.	.	S							S		S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					239	240	.	.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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