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Job DescriptionP31808
Confidence100.00%DateThu Jan 5 11:48:45 GMT 2012
Rank122Aligned Residues206
% Identity23%Templatec2ntnB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] reductase; PDBTitle: crystal structure of maba-c60v/g139a/s144l
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  KQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQR
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Template Sequence  AKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS. . . . . . . . . . . . . . . . . . . . . . . GAPKGLFGVEVDVTDS
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TTTTST
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TTS

TT
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   910.........20.........30.........40......... 50.........60.....
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
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Query Sequence  IAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAY
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Template Sequence  DAVDRAFTAVEEHQGPVEVLVSNAGLMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIAS. . . . . . . . VQANY
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   66...70.........80.........90.........100.........110.........120.........130.. .....
 
   166...170.........180.. .......190.........200.........210.........220.........230.........240....
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Query Sequence  AASKFATEGMMQVLADE. YQQRLRVNCINPGGTRTAMRASAFPTEDPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQP
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Template Sequence  AASKAGVIGMARSIARELSKANVTANVVAPGYIDTLQF. . . . . . IPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDG
Template Known Secondary structure  GGGT
SB


TT......STT
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B
SGGGTT

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   154.....160.........170.........180.........190. ........200.........210.........220.......
 
   245...
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Query Sequence  GRKP
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Template Sequence  GMGM
Template Known Secondary structure  TTT
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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