Job Description P31808 Confidence 98.39% Date Thu Jan 5 11:48:45 GMT 2012 Rank 251 Aligned Residues 220 % Identity 12% Template c2c20D_ PDB info PDB header:isomerase Chain: D: PDB Molecule:udp-glucose 4-epimerase; PDBTitle: crystal structure of udp-glucose 4-epimerase Resolution 2.7 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	L	V	T	G	A	S	D	G	I	G	R	E	A	A	M	T	Y	A	R	Y	G	A	T	V	I	L	L	G	R	N	E	E	K	L	R	Q	V	A	S	H	I	N	E	E	T	G	R	Q	P	Q	W	F	I	L	D	L	L	T	C	T	S	E	N	C	Q	Q	L	A	Q	R	I	A	V	N	Y	P	R	L
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	I	L	I	C	G	G	A	G	Y	I	G	S	H	A	V	K	K	L	V	D	E	G	L	S	V	V	V	V	D	N	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	T	G	H	E	D	A	I	T	E	G	A	K	F	Y	N	G	D	L	R	D	K	A	F	L	R	D	V	F	T	Q	E	N	I	E	A
Template Known Secondary structure							T	T	T	S													T	T										S	.	.	.	.	.	.	.	.	.	.	.	.	S	S		G	G	G	S		S	S	S							T	T											T	S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.													.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	V	L	H	N	A	G	L	L	G	D	V	C	P	M	S	E	Q	N	P	Q	V	W	Q	D	V	M	Q	V	N	V	N	A	T	F	M	L	T	Q	A	L	L	P	L	L	L	K	S	D	A	G	S	L	V	F	T	S	S	S	V	G	R	Q	G	R	A	N	W	G	A	Y	A	A	S	K	F	A	T	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	M	H	F	A	A	D	S	L	V	G	V	S	M	E	K	P	L	Q	Y	Y	N	N	N	V	Y	G	A	L	C	L	L	E	V	M	D	E	F	K	V	D	K	F	I	F	S	S	T	A	A	T	Y	G	E	V	D	V	D	L	I	T	E	E	T	M	T	N	P	T	N	T	Y	G	E	T	K	L	A	I	E
Template Known Secondary structure																																								T										G	G	G	G						S	S	B		T	T	S						S
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.																																				.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	M	M	Q	V	L	A	D	E	Y	Q	Q	R	L	R	V	N	C	I	N	P	G	G	T	R	T	A	M	R	A	S	A	F	P	T	E	D	P	Q	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	T	P	A
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.
Template Sequence		K	M	L	H	W	Y	S	Q	A	.	.	S	N	L	R	Y	K	I	F	R	Y	F	N	V	A	G	A	T	P	N	G	I	I	G	E	D	H	R	P	E	T	H	L	I	P	L	V	L	Q	V	A	L	G	Q	R	E	K	I	M	M	F	G	D	D	Y	N	T	P	D	G	T	C	I	R	D	Y	I	H	V	E
Template Known Secondary structure										T	.	.	S	S									S							T	T		S	S					S	S			S										T	T	S	S	S							S		S	S	S	S	S	S	S
Template Predicted Secondary structure											.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.			160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	M	P	L	Y	L	W	L	M	G	D	D	S	R	R	K	T	G	M	T	F	D	A	Q	P	G	R	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	V	A	A	H	F	L	G	L	K	D	L	Q	N	G	G	E	S	D	F	Y	N	L	G	N	G	N	G
Template Known Secondary structure																T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions