Job Description P0AAF3 Confidence 97.56% Date Thu Jan 5 11:12:46 GMT 2012 Rank 113 Aligned Residues 172 % Identity 10% Template c3bh0A_ PDB info PDB header:replication Chain: A: PDB Molecule:dnab-like replicative helicase; PDBTitle: atpase domain of g40p Resolution 2.35 Å

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		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	S	G	E	I	V	G	L	F	G	L	V	G	A	G	R	S	E	L	M	K	G	M	F	G	G	T	Q	I	T	A	G	Q	V	Y	I	D	Q	Q	P	I	D	I	R	K	P	S	H	A	I	A	A	G	M	M	L	C	P	E	D	R	K	A	E	G	I	I	P	V	H	S	V	R	D	N	I	N	I	S
Query Conservation
Alig confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	K	R	R	N	F	V	L	I	A	A	R	P	S	M	G	K	T	A	F	A	L	K	Q	A	K	N	M	S	D	N	D	D	V	V	N	L	H	S	L	E	M	G	K	K	E	N	I	K	R	L	I	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	G	S	I	N	A	Q	K	I	K	A	A
Template Known Secondary structure		B		T	T									T	T	S	S														T	T	T								S	S	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T								S
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.															.	.	.	.	.	250	.	.	.	.	.	.	.
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.		.	.	.	420	.	.	.	.	.								.	.	.	.	430
Predicted Secondary structure																																																												.										.	.	.	.	.	.	.
Query SS confidence																																																												.										.	.	.	.	.	.	.
Query Sequence		A	R	R	K	H	V	L	G	G	C	V	I	N	N	G	W	E	E	N	N	A	D	H	H	I	R	S	L	N	I	K	T	P	G	A	E	Q	L	I	M	N	L	S	G	G	N	Q	Q	K	A	I	L	G	R	W	L	S	E	.	E	M	K	V	I	L	L	D	E	.	.	.	.	.	.	.	P	T	R	G	I
Query Conservation																																																												.										.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.																																														.										.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.
Template Sequence		R	R	D	F	.	.	.	.	.	.	.	.	.	A	S	E	D	W	G	K	L	S	M	A	I	G	E	I	S	N	S	N	I	N	I	F	D	K	A	G	Q	S	V	N	Y	I	W	S	K	T	R	Q	T	K	R	K	N	P	G	K	R	V	I	V	M	I	D	Y	L	Q	L	L	E	P	A	K	A	N	D	S
Template Known Secondary structure						.	.	.	.	.	.	.	.	.		S	S														T	S								S			B														T	S	S	S										G	G	G	S	B		S		T	T	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.
Template SS confidence
		258	.	260	.										.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.		.	450	.	.	.	.	.	.	.	.	.	460																				.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure																				.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	G	A	K	H	E	I	Y	N	V	I	Y	A	L	A	A	Q	.	G	V	A	V	L	F	A	S	S	D	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	L	G	V	A	D	R	I	V	V	M	R
Query Conservation																				.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	T	N	Q	I	S	Q	I	S	R	D	L	K	K	M	A	R	E	L	D	V	V	V	I	A	L	S	Q	L	S	R	Q	V	E	Q	R	Q	D	K	R	P	M	L	S	D	L	R	E	S	G	Q	L	E	Q	D	A	D	I	I	E	F	L	Y
Template Known Secondary structure																					T											G	G	G	T	T	S	S	S					G	G	G	G	T	T	T	S							S
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions