Job Description P0AAF3 Confidence 96.97% Date Thu Jan 5 11:12:46 GMT 2012 Rank 181 Aligned Residues 128 % Identity 16% Template c3b9qA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:chloroplast srp receptor homolog, alpha subunit PDBTitle: the crystal structure of cpftsy from arabidopsis thaliana Resolution 1.75 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	S	F	D	C	Y	A	G	Q	V	H	A	L	M	G	E	N	G	A	G	K	S	T	L	L	K	I	L	S	G	N	Y	A	P	T	T	G	S	V	V	I	N	G	Q	E	M	S	F	S	D	T	T	A	A	L	N	A	G	V	A	I	I	Y	Q	E	L	H	L	V	P	E	M	T	V	A	E	N	I	Y
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	Q	L	G	F	R	K	P	A	V	I	M	I	V	G	V	N	G	G	G	K	T	T	S	L	G	K	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	R	L	K	N	E	G	T	K	V	L	M	A	A	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S					S	S	S										T	T	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.																					.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		L	G	Q	L	P	H	K	G	G	I	V	N	R	S	L	L	N	Y	E	A	G	L	Q	L	K	H	L	G	M	D	I	D	P	D	T	P	L	K	Y	L	S	I	G	Q	W	Q	M	V	E	I	A	K	A	L	A	R	N	A	K	I	I	A	F	D	E	P	T	.	S	S	L	S	A	R	E	I	D	N	L	F
Query Conservation																																																																					.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																.	.	.																								.
Template Conservation		.	.	.	.	.	.	.	.	.	.																																.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	T	F	R	A	A	A	S	D	Q	L	E	I	W	A	E	R	T	G	C	E	I	V	V	A	E	K	A	K	A	A	T	.	.	.	V	L	S	K	A	V	K	R	G	K	E	E	G	Y	D	V	V	L	C	D	T	S	G	R	L	H	T	N	Y	S	L	M	E	E	L	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.		S																T														.	.	.												T	T		S										S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																.	.	.
Template SS confidence
												202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.				.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		184	.	.	.	.	.	190					.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.
Query SS confidence									.	.	.	.
Query Sequence		R	V	I	R	E	L	R	.	.	.	.	K	E	G	R	V	I	L	Y	V
Query Conservation									.	.	.	.
Alig confidence									.	.	.	.
Template Conservation
Template Sequence		A	C	K	K	A	V	G	K	I	V	S	G	A	P	N	E	I	L	L	V
Template Known Secondary structure									T	T	S	T	T			S
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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