Job Description P0AAF3 Confidence 96.78% Date Thu Jan 5 11:12:46 GMT 2012 Rank 218 Aligned Residues 104 % Identity 16% Template c2w58B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:primosome component (helicase loader); PDBTitle: crystal structure of the dnai Resolution 2.50 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	G	Q	V	H	A	L	M	G	E	N	G	A	G	K	S	T	L	L	K	I	L	S	G	N	Y	A	P	T	T	G	S	V	V	I	N	G	Q	E	M	S	F	S	D	T	T	A	A	L	N	A	G	V	A	I	I	Y	Q	E	L	H	L	V	P	E	M	T	V	A	E	N	I	Y	L	G	Q	L	P	H
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Sequence		K	K	M	K	G	L	Y	L	H	G	S	F	G	V	G	K	T	Y	L	L	A	A	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	L	A	K	R	N	V	S	S	L	I	V	Y	V	P	E	L	F	R	.	.	.	.	.	.	.	.	.	.	E	L	K	H
Template Known Secondary structure												S	S	S	S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S														.	.	.	.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1159	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.																							.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.											.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		K	G	G	I	V	N	R	S	L	L	N	Y	E	A	G	L	Q	L	K	H	L	G	M	D	I	D	P	D	T	P	L	K	Y	L	S	I	G	Q	W	Q	M	V	E	I	A	K	A	L	A	R	N	A	K	I	I	A	F	D	E	.	P	T	S	S	L	S	A	R	E	I	D	N	L	F	R	V	I	R	E	L
Query Conservation																																																													.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	Q	D	Q	T	M	N	E	K	L	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	K	K	V	P	V	L	M	L	D	D	L	G	A	E	A	S	S	W	V	R	D	D	V	F	G	P	I	L	Q	Y	R
Template Known Secondary structure		T		S	S	S	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S								S	S									T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1207	.	.	1210	.	.	.	.	.	.	.	.	.																																				1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.
		190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	E	G	R	V	I	L	Y	V	S	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	F	E	N	L	P	T	F	F	T	S	N
Template Known Secondary structure				T	T								S
Template Predicted Secondary structure
Template SS confidence
		1253	.	.	.	.	.	.	1260	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions