Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAF3
Confidence96.51%DateThu Jan 5 11:12:46 GMT 2012
Rank283Aligned Residues130
% Identity15%Templatec2og2A_
PDB info PDB header:protein transportChain: A: PDB Molecule:putative signal recognition particle receptor; PDBTitle: crystal structure of chloroplast ftsy from arabidopsis2 thaliana
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60.........70.........80.........90.........100....
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  DISFDCYAGQVHALMGENGAGKSTLLKILSGNYAPTTGSVVINGQEMSFSDTTAALNAGVAIIYQELHLVPEMTVAENIY
Query Conservation   

  
  

   


 








  
 
      
 
   
               
  
 
   
    

 
 
 
Alig confidence 





























....................















..............
Template Conservation            

  


 
 




 



....................      
  
 

  
..............
Template Sequence  ELQLGFRKPAVIMIVGVNGGGKTTSLGKLA. . . . . . . . . . . . . . . . . . . . HRLKNEGTKVLMAAGD. . . . . . . . . . . . . .
Template Known Secondary structure  S



SSSS

TTS
....................TT




..............
Template Predicted Secondary structure 














....................




..............
Template SS confidence 















































































   118.120.........130.........140....... ..150.........160...
 
   105....110.........120.........130.........140.........150.........160.........170 .........180...
Predicted Secondary structure 

























.




Query SS confidence 

































































.












Query Sequence  LGQLPHKGGIVNRSLLNYEAGLQLKHLGMDIDPDTPLKYLSIGQWQMVEIAKALARNAKIIAFDEP. TSSLSAREIDNLF
Query Conservation                         
   

          

 

 


 

 

   
 






.
  

      
 
Alig confidence  ..........




























.

























.












Template Conservation  ..........  
  
 


   
    
          .                  
 







      
  

 
Template Sequence  . . . . . . . . . . TFRAAASDQLEIWAERTGCEIVVAEGDKA. KAATVLSKAVKRGKEEGYDVVLCDTSGRLHTNYSLMEELI
Template Known Secondary structure  ..........
S
T


SSSS
.
TT
S



SS

Template Predicted Secondary structure  ..........











.













Template SS confidence 















































































   164.....170.........180.........190.. .......200.........210.........220.........230..
 
   184.....190 .........
Predicted Secondary structure  ....


Query SS confidence 






. . . .








Query Sequence  RVIRELR. . . . KEGRVILYV
Query Conservation    
  
 ....  
 


 
Alig confidence 






....








Template Conservation   
           
    

Template Sequence  ACKKAVGKIVSGAPNEILLV
Template Known Secondary structure  STT

S
Template Predicted Secondary structure 






Template SS confidence 



















   233......240.........250..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions