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Job DescriptionP0AAF3
Confidence96.64%DateThu Jan 5 11:12:46 GMT 2012
Rank252Aligned Residues108
% Identity28%Templatec1xx6B_
PDB info PDB header:transferaseChain: B: PDB Molecule:thymidine kinase; PDBTitle: x-ray structure of clostridium acetobutylicum thymidine kinase with2 adp. northeast structural genomics target car26.
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   280.........290.........300.........310.........320.........330.........340.........350.........
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Query Sequence  RSGEIVGLFGLVGAGRSELMKGMFGGTQITAGQVYIDQQPIDIRKPSHAIAAGMMLCPEDRKAEGIIPVHSVRDNINISA
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Template Sequence  DHGWVEVIVGPXYSGKSEELIRRIRRAKIAKQKIQVFKPEAVAIKNSREILKYFE. . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  T


STTSSTT





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   6...10.........20.........30.........40.........50.........60
 
   360.........370.........380.........390.........400.........410.........420.........430.........
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Query Sequence  RRKHVLGGCVINNGWEENNADHHIRSLNIKTPGAEQLIMNLSGGNQQKAILGRWLSEEMKVILLDEPTRGIDVGAKHEIY
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EDTEVIAIDE. VQFFDDEI. . . . V
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S
S.GGGS
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   80......... 90....... .
 
   440.........450........ .460.........470...
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Query Sequence  NVIYALAAQGVAVLFASSD. . . . . . . . . . LPEVLGVADRIVVMR
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Template Sequence  EIVNKIAESGRRVICAGLDXDFRGKPFGPIPELXAIAEFVDKIQ
Template Known Secondary structure  TT

SB
TTS
B
TT
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   99100.........110.........120.........130.........140..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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