Job Description P76350 Confidence 99.96% Date Thu Jan 5 12:22:14 GMT 2012 Rank 3 Aligned Residues 401 % Identity 13% Template d1pv7a_ SCOP info MFS general substrate transporter MFS general substrate transporter LacY-like proton/sugar symporter Resolution 3.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	R	A	A	L	G	S	F	A	G	A	V	V	D	W	Y	D	F	L	L	Y	G	I	T	A	A	L	V	F	N	R	E	F	F	P	Q	V	S	P	A	M	G	T	L	A	A	F	A	T	F	G	V	G	F	L	F	R	P	L	G	G	V	I	F	G	H	F	G	D	R	L	G	R	K	R	M	L	M	L
Query Conservation
Alig confidence																																			.														.	.	.	.	.
Template Conservation																																			.														.	.	.	.	.
Template Sequence		K	N	T	N	F	W	M	F	G	L	F	F	F	F	Y	F	F	I	M	G	A	Y	F	P	F	F	P	I	W	L	H	D	I	.	N	H	I	S	K	S	D	T	G	I	I	F	A	.	.	.	.	.	A	I	S	L	F	S	L	L	F	Q	P	L	F	G	L	L	S	D	K	L	G	L	R	K	Y	L	L	W
Template Known Secondary structure			S																																.														.	.	.	.	.									T												T	T		T
Template Predicted Secondary structure																																			.														.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50						.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	W	M	M	G	I	A	T	A	L	I	G	I	L	P	S	F	S	T	I	G	W	W	A	P	I	L	L	V	T	L	R	A	I	Q	G	F	A	V	G	G	E	W	G	G	A	A	L	L	S	V	E	S	A	P	K	N	K	K	A	F	Y	S	S	G	V	Q	V	G	Y	G	V	G	L	L	L	S	T	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	T	G	M	L	V	M	F	A	P	F	F	I	F	I	F	G	P	L	L	Q	Y	N	I	L	V	G	S	I	V	G	G	I	Y	L	G	F	C	F	N	A	G	A	P	A	V	E	A	F	I	E	K	V	S	R	R	S	N	F	E	F	G	R	A	R	M	F	G	C	V	G	W	A	L	G	A	S	I	V
Template Known Secondary structure									T								T							T	T								T	T	T	T	G	G	G	G	G	T	T																	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	S	L	I	S	M	M	T	T	D	E	Q	F	L	S	W	G	W	R	I	P	F	L	F	S	I	V	L	V	L	G	A	L	W	V	R	N	G	M	E	E	S	A	E	F	E	Q	Q	Q	H	Y	Q	A	A	A	K	K	R	I	P	V	I	E	A	L	L	R	H	P	G	A	F	L	K	I	I	A	L	R
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.
Template Sequence		G	I	M	.	.	.	.	.	.	.	.	.	.	F	T	I	N	N	Q	F	V	F	W	L	G	S	G	C	A	L	I	L	A	V	L	L	F	F	A	K	T	D	A	P	S	S	A	T	V	A	N	A	V	G	A	N	H	S	A	F	S	L	K	L	A	L	E	L	F	R	Q	P	K	L	W	F	L	S	L	Y
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.																									S	S				S		S	S	S		S	S					S														T	T	S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		159	160	.											.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	C	E	L	L	T	M	Y	I	V	T	A	F	A	L	N	Y	S	T	Q	N	M	G	L	P	R	E	L	F	L	N	I	G	L	L	V	G	G	L	S	C	L	T	I	P	C	F	A	W	L	A	D	R	F	G	R	R	R	V	Y	I	T	G	T	L	I	G	T	L	S	A	F	P	F	F	M	A	L	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	G	V	S	C	T	Y	D	V	F	D	Q	Q	F	A	N	F	F	T	S	F	F	A	T	G	E	Q	G	T	R	V	F	G	Y	V	T	T	M	G	E	L	L	N	A	S	I	M	F	F	A	P	L	I	I	N	R	I	G	G	K	N	A	L	L	L	A	G	T	I	M	S	V	R	I	I	G	S	S	F
Template Known Secondary structure																					T	T	S	S	S																									T	T																														T
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	I	F	W	I	V	F	F	S	I	M	L	A	N	I	A	H	D	M	V	V	C	V	Q	Q	P	M	F	T	E	M	F	G	A	S	Y	R	Y	S	G	A	G	V	G	Y	Q	V	A	S	V	V	G	G	G	F	T	P	F	I	A	A	A	L	I	T	Y	F	A	G	N	W	H	S	V	A	I	Y	L	L
Query Conservation
Alig confidence																																																																							.	.
Template Conservation																																																																							.	.
Template Sequence		A	T	S	A	L	E	V	V	I	L	K	T	L	H	M	F	E	V	P	F	L	L	V	G	C	F	K	Y	I	T	S	Q	F	E	V	R	F	S	A	T	I	Y	L	V	C	F	C	F	F	K	Q	L	A	M	I	F	M	S	V	L	A	G	N	M	Y	E	S	I	G	.	.	F	Q	G	A	Y	L	V	L	G
Template Known Secondary structure																																		S		G	G	G										T	T	T																					.	.
Template Predicted Secondary structure																																																																							.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.			.	.	380	.	.	.	.	.	.
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	C	L	I	S	A	M	T	A	L	L	M	K	D	S	Q	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	A	L	G	F	T	L	I	S	V	F	T	L	S	G	P	G	P
Template Known Secondary structure															S			S	S
Template Predicted Secondary structure
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions